unable to access index for repository https://cran.rstudio.com/bin/macosx/big-sur-arm64/contrib/4.5:

Input 'save-always' has been deprecated with message: save-always does not work as intended and will be removed in a future release. A separate `actions/cache/restore` step should be used instead. See https://github.com/actions/cache/tree/main/save#always-save-cache for more details.

unable to access index for repository https://ftp.gwdg.de/pub/misc/bioconductor/packages/3.21/data/annotation/bin/macosx/big-sur-arm64/contrib/4.5:

unable to access index for repository https://ftp.gwdg.de/pub/misc/bioconductor/packages/3.21/workflows/bin/macosx/big-sur-arm64/contrib/4.5:

unable to access index for repository https://ftp.gwdg.de/pub/misc/bioconductor/packages/3.21/books/bin/macosx/big-sur-arm64/contrib/4.5:

unable to access index for repository https://cran.rstudio.com/bin/macosx/big-sur-arm64/contrib/4.5:

Input 'save-always' has been deprecated with message: save-always does not work as intended and will be removed in a future release. A separate `actions/cache/restore` step should be used instead. See https://github.com/actions/cache/tree/main/save#always-save-cache for more details.

The following actions use a deprecated Node.js version and will be forced to run on node20: actions/upload-artifact@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/

Input 'save-always' has been deprecated with message: save-always does not work as intended and will be removed in a future release. A separate `actions/cache/restore` step should be used instead. See https://github.com/actions/cache/tree/main/save#always-save-cache for more details.

file 'Rarr/cleanup' did not have execute permissions: corrected

file 'Rarr/configure' did not have execute permissions: corrected

unable to access index for repository https://ftp.gwdg.de/pub/misc/bioconductor/packages/3.21/data/annotation/bin/windows/contrib/4.5:

unable to access index for repository https://ftp.gwdg.de/pub/misc/bioconductor/packages/3.21/workflows/bin/windows/contrib/4.5:

unable to access index for repository https://ftp.gwdg.de/pub/misc/bioconductor/packages/3.21/books/bin/windows/contrib/4.5:

unable to access index for repository https://ftp.gwdg.de/pub/misc/bioconductor/packages/3.21/data/annotation/bin/windows/contrib/4.5:

unable to access index for repository https://ftp.gwdg.de/pub/misc/bioconductor/packages/3.21/workflows/bin/windows/contrib/4.5:

unable to access index for repository https://ftp.gwdg.de/pub/misc/bioconductor/packages/3.21/books/bin/windows/contrib/4.5:

Input 'save-always' has been deprecated with message: save-always does not work as intended and will be removed in a future release. A separate `actions/cache/restore` step should be used instead. See https://github.com/actions/cache/tree/main/save#always-save-cache for more details.

Input 'save-always' has been deprecated with message: save-always does not work as intended and will be removed in a future release. A separate `actions/cache/restore` step should be used instead. See https://github.com/actions/cache/tree/main/save#always-save-cache for more details.

Input 'save-always' has been deprecated with message: save-always does not work as intended and will be removed in a future release. A separate `actions/cache/restore` step should be used instead. See https://github.com/actions/cache/tree/main/save#always-save-cache for more details.

The following actions use a deprecated Node.js version and will be forced to run on node20: actions/upload-artifact@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/

The following artifacts were uploaded using a version of actions/upload-artifact that is scheduled for deprecation: "BiocCheck", "Linux-binary", "macOS-binary", "Windows-binary". Please update your workflow to use v4 of the artifact actions. Learn more: https://github.blog/changelog/2024-04-16-deprecation-notice-v3-of-the-artifact-actions/

Input 'save-always' has been deprecated with message: save-always does not work as intended and will be removed in a future release. A separate `actions/cache/restore` step should be used instead. See https://github.com/actions/cache/tree/main/save#always-save-cache for more details.

Input 'save-always' has been deprecated with message: save-always does not work as intended and will be removed in a future release. A separate `actions/cache/restore` step should be used instead. See https://github.com/actions/cache/tree/main/save#always-save-cache for more details.