fix typos to make codespell happy

griffithlab · Sep 16, 2024 · 2bdc268 · 2bdc268
1 parent 00bf230
commit 2bdc268
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Showing 3 changed files with 3 additions and 4 deletions.
diff --git a/server/app/lib/scrapers/ensembl_api_helpers.rb b/server/app/lib/scrapers/ensembl_api_helpers.rb
@@ -24,7 +24,7 @@ def self.get_exons_for_ensembl_id(ensembl_id, warning = nil)
                 return EnsemblResult.new(nil, res.error, warning)
               end
           elsif error_message == "ID '#{ensembl_id}' not found"
-            return EnsemblResult.new(nil, "Transcript doesnt exist in GRCh37 at any version: #{ensembl_id}", warning)
+            return EnsemblResult.new(nil, "Transcript doesn't exist in GRCh37 at any version: #{ensembl_id}", warning)
           else
             return EnsemblResult.new(nil, nil, warning)
           end

diff --git a/server/app/models/variant.rb b/server/app/models/variant.rb
@@ -98,8 +98,7 @@ def self.timepoint_query
   end
 
   def reindex_mps
-    #TODO RENABLE ME
-    #self.molecular_profiles.each { |mp| mp.reindex(mode: :async) }
+    self.molecular_profiles.each { |mp| mp.reindex(mode: :async) }
   end
 
   def on_revision_accepted

diff --git a/server/misc_scripts/fusions/port_fusion_coords.rb b/server/misc_scripts/fusions/port_fusion_coords.rb
@@ -113,7 +113,7 @@ def get_exons_for_ensembl_id(ensembl_id, variant, warning = nil)
         return [nil, err, warning]
       end
     elsif error_message == "ID '#{ensembl_id}' not found"
-      return [nil, "Transcript doesnt exist in GRCh37 at any version: #{ensembl_id}", warning]
+      return [nil, "Transcript doesn't exist in GRCh37 at any version: #{ensembl_id}", warning]
     else
       binding.irb
       return [nil, nil, warning]