Pseudo Predict based on genblastA and genewise
input:protein and DNA fasta format files ,gff format annotion file
conda install -c bioconda genblasta
conda install -c bioconda wise2
the Rscript is used to pint a qqimg of the paralog genes.
Ref:
https://www.sciencedirect.com/science/article/pii/S2590346222002590?via%3Dihub
Differences in pseudogene evolution contributed to the contrasting flavors of turnip and Chiifu, two Brassica rapa subspecies