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Merge pull request #61 from n8thangreen/dev #122

Merge pull request #61 from n8thangreen/dev

Merge pull request #61 from n8thangreen/dev #122

# Workflow derived from https://github.com/r-lib/actions/tree/master/examples
# Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help
on:
push:
branches: [dev, main, master]
pull_request:
branches: [dev, main, master]
name: R-CMD-check
jobs:
R-CMD-check:
runs-on: ${{ matrix.config.os }}
name: ${{ matrix.config.os }} (${{ matrix.config.r }})
strategy:
fail-fast: false
matrix:
config:
- {os: macOS-latest, r: 'release'}
- {os: windows-latest, r: 'release'}
- {os: ubuntu-latest, r: 'devel', http-user-agent: 'release'}
- {os: ubuntu-latest, r: 'release'}
- {os: ubuntu-latest, r: 'oldrel-1'}
env:
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
R_KEEP_PKG_SOURCE: yes
RSPM: ${{ matrix.config.rspm }}
steps:
- uses: actions/checkout@v2
- uses: r-lib/actions/setup-r@v2
with:
extra-repositories: 'https://inla.r-inla-download.org/R/testing'
r-version: ${{ matrix.config.r }}
http-user-agent: ${{ matrix.config.http-user-agent }}
use-public-rspm: true
- uses: r-lib/actions/setup-pandoc@v2
- name: Add inla repo
run: |
cat('options(repos = c(INLA = "https://inla.r-inla-download.org/R/testing/", getOption("repos")))', file = "~/.Rprofile", append = TRUE)
# cat("\noptions(tinytex.verbose = TRUE)\n", file = "~/.Rprofile", append = TRUE)
shell: Rscript {0}
- name: Double check repos
run: |
print(getOption("repos"))
shell: Rscript {0}
# - name: Install JAGS
# run: |
# sudo apt-get update -y
# sudo apt-get install -y jags
- name: Install jags (windows-latest)
if: runner.os == 'Windows'
run: |
curl.exe -o wjags.exe --url https://deac-fra.dl.sourceforge.net/project/mcmc-jags/JAGS/4.x/Windows/JAGS-4.2.0-Rtools33.exe
wjags.exe /S
del wjags.exe
shell: cmd
- name: Install jags (macOS-latest)
if: runner.os == 'macOS'
run : brew install jags
- uses: r-lib/actions/setup-r-dependencies@v2
with:
dependencies: '"all"'
extra-packages: |
rcmdcheck
- uses: r-lib/actions/check-r-package@v2
with:
upload-snapshots: true