Fix code coverage reporting #785
Workflow file for this run
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| name: CI | |
| on: | |
| push: | |
| branches: | |
| - main | |
| pull_request: | |
| branches: | |
| - main | |
| workflow_dispatch: | |
| jobs: | |
| lint: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@v4 | |
| - name: Lint with Ruff | |
| uses: astral-sh/ruff-action@v1 | |
| - name: Format with Ruff | |
| uses: astral-sh/ruff-action@v1 | |
| with: | |
| args: 'format --check' | |
| typing: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@v4 | |
| - name: Install uv | |
| uses: astral-sh/setup-uv@v3 | |
| - name: Set up Python | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version-file: pyproject.toml | |
| - name: Check types with mypy | |
| run: | | |
| uv run --extra typing mypy | |
| test: | |
| runs-on: ubuntu-22.04 | |
| services: | |
| mysql: | |
| image: mysql:8.0 | |
| env: | |
| MYSQL_ROOT_PASSWORD: root | |
| ports: | |
| - "8888:3306" | |
| options: --health-cmd="mysqladmin ping" --health-interval=10s --health-timeout=5s --health-retries=3 | |
| strategy: | |
| matrix: | |
| openfoam-version: [2406, 2006, 12, 9] | |
| python-version: ['3.7', '3.8', '3.9', '3.10', '3.11', '3.12', '3.13'] | |
| slurm: [false] | |
| include: | |
| - openfoam-version: 2406 | |
| python-version: '3.13' | |
| slurm: true | |
| - openfoam-version: 12 | |
| python-version: '3.13' | |
| slurm: true | |
| - openfoam-version: 2006 | |
| python-version: '3.7' | |
| slurm: true | |
| - openfoam-version: 9 | |
| python-version: '3.7' | |
| slurm: true | |
| fail-fast: false | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@v4 | |
| - name: Install uv | |
| uses: astral-sh/setup-uv@v3 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Set up OpenFOAM | |
| uses: gerlero/setup-openfoam@v1 | |
| with: | |
| openfoam-version: ${{ matrix.openfoam-version }} | |
| - name: Set up Slurm | |
| if: matrix.slurm | |
| uses: koesterlab/setup-slurm-action@v1 | |
| - name: Install test dependencies | |
| run: | | |
| uv pip install --system .[test] | |
| - name: Test with pytest | |
| run: | | |
| pytest --cov=foamlib | |
| env: | |
| OMPI_MCA_rmaps_base_oversubscribe: 1 | |
| OMPI_ALLOW_RUN_AS_ROOT: 1 | |
| OMPI_ALLOW_RUN_AS_ROOT_CONFIRM: 1 | |
| - name: Upload code coverage results to Codecov | |
| uses: codecov/codecov-action@v4 | |
| with: | |
| token: ${{ secrets.CODECOV_TOKEN }} | |
| build: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@v4 | |
| - name: Install uv | |
| uses: astral-sh/setup-uv@v3 | |
| - name: Check package build | |
| run: | | |
| uv build |