fixed liquibase files

gbif · Oct 23, 2024 · ae3601d · ae3601d
1 parent f2156e9
commit ae3601d
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Showing 8 changed files with 52 additions and 27 deletions.
diff --git a/registry-persistence/src/main/resources/liquibase/144-mdt-endpoint-installation-types.xml b/registry-persistence/src/main/resources/liquibase/144-mdt-endpoint-installation-types.xml
@@ -1,14 +1,15 @@
+
 <databaseChangeLog
-    xmlns="http://www.liquibase.org/xml/ns/dbchangelog"
-    xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
-    xsi:schemaLocation="http://www.liquibase.org/xml/ns/dbchangelog http://www.liquibase.org/xml/ns/dbchangelog/dbchangelog-2.0.xsd">
+  xmlns="http://www.liquibase.org/xml/ns/dbchangelog"
+  xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
+  xsi:schemaLocation="http://www.liquibase.org/xml/ns/dbchangelog http://www.liquibase.org/xml/ns/dbchangelog/dbchangelog-2.0.xsd">
 
   <changeSet id="144" author="fmendez" runInTransaction="false">
     <sql splitStatements="false" stripComments="true">
       <![CDATA[
-      ALTER TYPE enum_installation_type ADD VALUE 'MDT_INSTALLATION';
-      ALTER TYPE enum_endpoint_type ADD VALUE 'BIOM_1_0';
-      ALTER TYPE enum_endpoint_type ADD VALUE 'BIOM_2_1';
+         ALTER TYPE enum_installation_type ADD VALUE 'MDT_INSTALLATION';
+         ALTER TYPE enum_endpoint_type ADD VALUE 'BIOM_1_0';
+         ALTER TYPE enum_endpoint_type ADD VALUE 'BIOM_2_1';
       ]]>
     </sql>
   </changeSet>

diff --git a/registry-persistence/src/main/resources/liquibase/145-contact-salutation.xml b/registry-persistence/src/main/resources/liquibase/145-contact-salutation.xml
@@ -1,13 +1,11 @@
 <databaseChangeLog
-    xmlns="http://www.liquibase.org/xml/ns/dbchangelog"
-    xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
-    xsi:schemaLocation="http://www.liquibase.org/xml/ns/dbchangelog http://www.liquibase.org/xml/ns/dbchangelog/dbchangelog-2.0.xsd">
+  xmlns="http://www.liquibase.org/xml/ns/dbchangelog"
+  xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
+  xsi:schemaLocation="http://www.liquibase.org/xml/ns/dbchangelog http://www.liquibase.org/xml/ns/dbchangelog/dbchangelog-2.0.xsd">
 
-  <changeSet id="143" author="mpodolskiy">
-    <sql splitStatements="false" stripComments="false">
-      <![CDATA[
-      ALTER TABLE contact ADD COLUMN salutation text;
-      ]]>
+  <changeSet id="145" author="mpodolskiy">
+    <sql>
+      ALTER TABLE contact ADD COLUMN salutation TEXT;
     </sql>
   </changeSet>
 </databaseChangeLog>
diff --git a/registry-persistence/src/main/resources/liquibase/146-function-search-paths.xml b/registry-persistence/src/main/resources/liquibase/146-function-search-paths.xml
@@ -0,0 +1,25 @@
+<databaseChangeLog
+  xmlns="http://www.liquibase.org/xml/ns/dbchangelog"
+  xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
+  xsi:schemaLocation="http://www.liquibase.org/xml/ns/dbchangelog http://www.liquibase.org/xml/ns/dbchangelog/dbchangelog-2.0.xsd">
+
+  <!-- Set the search paths to public. For security, VACUUM uses an empty search path and fails otherwise.
+       https://stackoverflow.com/questions/65237130/getting-function-does-not-exist-error-in-vacuumdb -->
+  <changeSet id="146" author="mblissett">
+    <sql>
+      ALTER FUNCTION collection_change_trigger SET search_path = public;
+      ALTER FUNCTION collection_contact_change_trigger SET search_path = public;
+      ALTER FUNCTION collection_descriptor_change_trigger SET search_path = public;
+      ALTER FUNCTION collection_descriptor_group_change_trigger SET search_path = public;
+      ALTER FUNCTION collection_descriptor_verbatim_change_trigger SET search_path = public;
+      ALTER FUNCTION contact_change_trigger SET search_path = public;
+      ALTER FUNCTION dataset_change_trigger SET search_path = public;
+      ALTER FUNCTION installation_change_trigger SET search_path = public;
+      ALTER FUNCTION institution_change_trigger SET search_path = public;
+      ALTER FUNCTION network_change_trigger SET search_path = public;
+      ALTER FUNCTION node_change_trigger SET search_path = public;
+      ALTER FUNCTION organization_change_trigger SET search_path = public;
+      ALTER FUNCTION normalize_name SET search_path = public;
+    </sql>
+  </changeSet>
+</databaseChangeLog>
diff --git a/...es/liquibase/146-isil-clb-identifiers.xml → ...es/liquibase/147-isil-clb-identifiers.xml b/...es/liquibase/146-isil-clb-identifiers.xml → ...es/liquibase/147-isil-clb-identifiers.xml
@@ -3,7 +3,7 @@
   xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
   xsi:schemaLocation="http://www.liquibase.org/xml/ns/dbchangelog http://www.liquibase.org/xml/ns/dbchangelog/dbchangelog-2.0.xsd">
 
-  <changeSet id="144" author="auzun" runInTransaction="false">
+  <changeSet id="147" author="auzun" runInTransaction="false">
     <sql splitStatements="false" stripComments="true">
       <![CDATA[
          ALTER TYPE public.enum_identifier_type ADD VALUE 'CLB_DATASET_KEY';

diff --git a/...base/147-primary-identifier-grscicoll.xml → ...base/148-primary-identifier-grscicoll.xml b/...base/147-primary-identifier-grscicoll.xml → ...base/148-primary-identifier-grscicoll.xml
@@ -3,7 +3,7 @@
   xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
   xsi:schemaLocation="http://www.liquibase.org/xml/ns/dbchangelog http://www.liquibase.org/xml/ns/dbchangelog/dbchangelog-2.0.xsd">
 
-  <changeSet id="145" author="auzun" runInTransaction="false">
+  <changeSet id="148" author="auzun" runInTransaction="false">
     <sql splitStatements="false" stripComments="true">
       <![CDATA[
          ALTER TABLE collection_identifier ADD COLUMN is_primary BOOLEAN NOT NULL DEFAULT false;

diff --git a/...8-taxon-fields-collection-descriptors.xml → ...9-taxon-fields-collection-descriptors.xml b/...8-taxon-fields-collection-descriptors.xml → ...9-taxon-fields-collection-descriptors.xml
@@ -3,7 +3,7 @@
     xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
     xsi:schemaLocation="http://www.liquibase.org/xml/ns/dbchangelog http://www.liquibase.org/xml/ns/dbchangelog/dbchangelog-2.0.xsd">
 
-  <changeSet id="148" author="mlopez" runInTransaction="false">
+  <changeSet id="149" author="mlopez" runInTransaction="false">
     <sql splitStatements="false" stripComments="true">
       <![CDATA[
          ALTER TABLE collection_descriptor ADD COLUMN kingdom_key integer;

diff --git a/...uibase/149-similar-name-list-function.xml → ...uibase/150-similar-name-list-function.xml b/...uibase/149-similar-name-list-function.xml → ...uibase/150-similar-name-list-function.xml
@@ -1,9 +1,9 @@
 <databaseChangeLog
-    xmlns="http://www.liquibase.org/xml/ns/dbchangelog"
-    xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
-    xsi:schemaLocation="http://www.liquibase.org/xml/ns/dbchangelog http://www.liquibase.org/xml/ns/dbchangelog/dbchangelog-2.0.xsd">
+  xmlns="http://www.liquibase.org/xml/ns/dbchangelog"
+  xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
+  xsi:schemaLocation="http://www.liquibase.org/xml/ns/dbchangelog http://www.liquibase.org/xml/ns/dbchangelog/dbchangelog-2.0.xsd">
 
-  <changeSet id="149" author="mlopez" runInTransaction="false">
+  <changeSet id="150" author="mlopez" runInTransaction="false">
     <sql splitStatements="false" stripComments="true">
       <![CDATA[
          CREATE OR REPLACE FUNCTION similar_name_score(input1 text, input2 text[])

diff --git a/registry-persistence/src/main/resources/liquibase/master.xml b/registry-persistence/src/main/resources/liquibase/master.xml
@@ -145,14 +145,15 @@
   <include file="liquibase/137-featured-image-attribution-grscicoll.xml" />
   <include file="liquibase/138-dataset-occurrence-download-created-index.xml" />
   <include file="liquibase/139-dataset-occurrence-download-created-index.xml" />
-  <include file="liquibase/140-collection-descriptors-grscicoll.xml" />
-  <include file="liquibase/141-ih-identifier-change-sugestion.xml" />
+  <include file="liquibase/140-ih-identifier-change-sugestion.xml" />
+  <include file="liquibase/141-collection-descriptors-grscicoll.xml" />
   <include file="liquibase/142-grscicoll-lookup-indexes.xml" />
   <include file="liquibase/143-removed-fields-grscicoll.xml" />
   <include file="liquibase/144-mdt-endpoint-installation-types.xml" />
   <include file="liquibase/145-contact-salutation.xml" />
-  <include file="liquibase/146-isil-clb-identifiers.xml" />
-  <include file="liquibase/147-primary-identifier-grscicoll.xml" />
-  <include file="liquibase/148-taxon-fields-collection-descriptors.xml" />
-  <include file="liquibase/149-similar-name-list-function.xml" />
+  <include file="liquibase/146-function-search-paths.xml" />
+  <include file="liquibase/147-isil-clb-identifiers.xml" />
+  <include file="liquibase/148-primary-identifier-grscicoll.xml" />
+  <include file="liquibase/149-taxon-fields-collection-descriptors.xml" />
+  <include file="liquibase/150-similar-name-list-function.xml" />
 </databaseChangeLog>