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Original file line number | Diff line number | Diff line change |
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- [Build from source](#build-from-source) | ||
- [prep Frontier modules](#prep-frontier-modules) | ||
- [module output on Frontier](#module-output-on-frontier) | ||
- [setup miniconda3](#setup-miniconda3) | ||
- [build pytorch](#build-pytorch) | ||
- [Build options: see `setup.py`](#build-options-see-setuppy) | ||
- [regenerate CMAKE build files](#regenerate-cmake-build-files) | ||
- [Kineto and roctracer.h problem](#kineto-and-roctracerh-problem) | ||
- [Build DeepSpeed](#build-deepspeed) | ||
- [Install GPTNeoX](#install-gptneox) | ||
## On rocm/pytorch compatibility | ||
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# Build from source | ||
![alt text](frontier_rocmTorch_table.png) | ||
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## prep Frontier modules | ||
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## Basic environment setup | ||
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``` | ||
module load PrgEnv-gnu | ||
module load gcc/10.3.0 | ||
module load rocm/5.1.0 | ||
module load craype-x86-trento | ||
ROCM_VER=6.0.0 | ||
module load PrgEnv-gnu/8.5.0 | ||
module load rocm/6.0.0 | ||
module load gcc-native/12.3 | ||
module load craype-accel-amd-gfx90a | ||
module load cmake | ||
module load miniforge3/23.11.0-0 | ||
module unload darshan-runtime | ||
export HCC_AMDGPU_TARGET=gfx90a | ||
export PYTORCH_ROCM_ARCH=gfx90a | ||
export ROCM_SOURCE_DIR=/opt/rocm-5.1.0 | ||
export CRAY_CPU_TARGET=x86_64 # just to remove warning noise | ||
export ROCM_HOME=/opt/rocm-${ROCM_VER} | ||
export CC=cc | ||
export CXX=CC | ||
``` | ||
## module output on Frontier | ||
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``` | ||
Currently Loaded Modules: | ||
1) libfabric/1.15.2.0 4) cray-dsmml/0.2.2 7) gcc/10.3.0 10) DefApps/default 13) craype-accel-amd-gfx90a | ||
2) craype-network-ofi 5) cray-libsci/22.12.1.1 8) darshan-runtime/3.4.0 11) cray-mpich/8.1.23 14) craype-x86-trento | ||
3) craype/2.7.19 6) PrgEnv-gnu/8.3.3 9) hsi/default 12) rocm/5.1.0 | ||
``` | ||
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Note: One of the module between `craype-x86-trento` and `craype-accel-amd-gfx90a` fixed a linking problem. My guess is the former. | ||
## conda and mpi4py setup | ||
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## setup miniconda3 | ||
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``` | ||
wget https://repo.anaconda.com/miniconda/Miniconda3-latest-Linux-x86_64.sh | ||
bash ./Miniconda3-latest-Linux-x86_64.sh -b -p miniconda | ||
conda create -n pytorch python=3.8 | ||
conda active pytorch | ||
pip install -r requirements.txt | ||
``` | ||
conda create -p /sw/aaims/frontier/rocm600-pt230 \ | ||
python=3.10 numpy=1 -c conda-forge | ||
## build pytorch | ||
source activate /sw/aaims/frontier/rocm600-pt230 | ||
pip install pyyaml typing_extensions ninja packaging | ||
``` | ||
git clone --recursive -b IFU-master-2022-11-22 https://github.com/ROCmSoftwarePlatform/pytorch | ||
python tools/amd_build/build_amd.py | ||
USE_KINETO=0 USE_ROCM=1 MAX_JOBS=4 python setup.py bdist_wheel 2>&1 | tee output | ||
# Optional: install mpi4py | ||
MPICC="cc -shared" pip install --no-cache-dir --no-binary=mpi4py mpi4py | ||
``` | ||
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### Build options: see `setup.py` | ||
## Build pytorch | ||
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``` | ||
USE_KINETO=0 # disable profiler, ask for roctracer.h | ||
``` | ||
### regenerate CMAKE build files | ||
TORCH_VER=release/2.3-frontier | ||
git clone --recursive -b ${TORCH_VER} \ | ||
https://github.com/michael-sandoval/pytorch | ||
This will trigger a rebuild for the changed configuration. | ||
cd pytorch | ||
``` | ||
cd pytorch/build | ||
rm CMakeCache.txt | ||
``` | ||
To remove previous build as well: | ||
# redundant | ||
#git submodule init | ||
#git submodule update | ||
``` | ||
python setup.py clean | ||
``` | ||
### Kineto and roctracer.h problem | ||
# If using GCC12 to build torch: | ||
export CFLAGS=" -Wno-error=maybe-uninitialized -Wno-error=uninitialized -Wno-error=restrict -Wno-error=nonnull" | ||
export CXXFLAGS=" -Wno-error=maybe-uninitialized -Wno-error=uninitialized -Wno-error=restrict -Wno-error=nonnull" | ||
export BUILD_TEST=OFF | ||
Kineto requires roctracer, which fails in rocm 5.1.0 | ||
``` | ||
if (NOT ROCM_SOURCE_DIR) | ||
set(ROCM_SOURCE_DIR "$ENV{ROCM_SOURCE_DIR}") | ||
message(INFO " ROCM_SOURCE_DIR = ${ROCM_SOURCE_DIR}") | ||
endif() | ||
``` | ||
# Generate HIP files | ||
python3 tools/amd_build/build_amd.py | ||
For reason unknown at this point, the `ROCM_SOURCE_DIR` is still set as `/opt/rocm` instead of `/opt/rocm-5.1.0` even though the environment variable is set. | ||
So the easy workaround is: | ||
# Set the PyTorch build version | ||
export PYTORCH_BUILD_VERSION="2.3.0" | ||
export PYTORCH_BUILD_NUMBER=1 | ||
``` | ||
set(ROCM_SOURCE_DIR /opt/rocm-5.1.0) | ||
# Point libkineto away from "/opt/rocm" to "/opt/rocm-x.y.z" | ||
cp ./frontier_fixes/third_party/kineto/libkineto/CMakeLists.txt \ | ||
./third_party/kineto/libkineto/CMakeLists.txt | ||
# Fix "rocm-core/rocm_version.h" reference post HIP conversion (ONLY WHEN USING ROCm < 6.0.0) | ||
<!-- cp ./frontier_fixes/aten/src/ATen/hip/tunable/TunableGemm.h \ | ||
./aten/src/ATen/hip/tunable/TunableGemm.h --> | ||
# Build PyTorch | ||
USE_ROCM=1 USE_CUDA=OFF USE_NVCC=OFF BUILD_CAFFE2_OPS=0 ROCM_SOURCE_DIR="/opt/rocm-${ROCM_VER}" MAX_JOBS=8 python setup.py bdist_wheel | ||
``` | ||
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## Build DeepSpeed | ||
After compilation, I have: | ||
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``` | ||
git clone https://github.com/microsoft/DeepSpeed | ||
DS_BUILD_FUSED_LAMB=1 DS_BUILD_FUSED_ADAM=1 DS_BUILD_TRANSFORMER=1 DS_BUILD_STOCHASTIC_TRANSFORMER=1 DS_BUILD_UTILS=1 python setup.py bdist_wheel | ||
python setup.py install | ||
dist/torch-2.3.0-cp310-cp310-linux_x86_64.whl | ||
``` | ||
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## Install GPTNeoX | ||
## Verify | ||
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``` | ||
pip install shortuuid # missed from | ||
git clone https://github.com/EleutherAI/gpt-neox.git | ||
pip install -r requirements/requirements.txt | ||
pip install -r requirements/requirements-wandb.txt | ||
pip install -r requirements/requirements-tensorboard.txt | ||
pip install dist/*.whl | ||
``` | ||
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``` | ||
>>> import torch | ||
Traceback (most recent call last): | ||
File "<stdin>", line 1, in <module> | ||
File "/lustre/orion/stf218/proj-shared/fwang2/pytorch/torch/__init__.py", line 546, in <module> | ||
raise ImportError(textwrap.dedent(''' | ||
ImportError: Failed to load PyTorch C extensions: | ||
It appears that PyTorch has loaded the `torch/_C` folder | ||
of the PyTorch repository rather than the C extensions which | ||
are expected in the `torch._C` namespace. This can occur when | ||
using the `install` workflow. e.g. | ||
$ python setup.py install && python -c "import torch" | ||
This error can generally be solved using the `develop` workflow | ||
$ python setup.py develop && python -c "import torch" # This should succeed | ||
or by running Python from a different directory. | ||
``` | ||
|
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