R-CMD-check #217
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| on: | |
| push: | |
| branches: | |
| - main | |
| paths: | |
| - 'R/**' | |
| - 'DESCRIPTION' | |
| - 'NAMESPACE' | |
| - 'src/**' | |
| - 'tests/**' | |
| pull_request: | |
| schedule: | |
| # Rerun checks daily, after facilebio/facilebio_base_extra is rebuilt. | |
| # This will catch failures due to changes in functionality of packages | |
| # we depend on. | |
| # facilebio_base_extra builds every day 4AM pacific time (11 AM UTC), so | |
| # we will build this an hour after that (the same time facilebio/facilebio) | |
| - cron: '0 12 * * *' | |
| workflow_dispatch: | |
| inputs: | |
| dummy: | |
| description: 'A dummy variable to enable manual workflow execution' | |
| required: false | |
| default: 'gitty up' | |
| name: R-CMD-check | |
| jobs: | |
| R-CMD-check: | |
| if: "!contains(github.event.head_commit.message, 'ci-skip')" | |
| runs-on: ubuntu-latest | |
| container: facilebio/facilebio | |
| env: | |
| R_REMOTES_NO_ERRORS_FROM_WARNINGS: true | |
| NOT_CRAN: true | |
| CI: true | |
| GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} | |
| GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | |
| steps: | |
| - name: Checkout Repository | |
| uses: actions/checkout@v2 | |
| - name: Setup R | |
| uses: r-lib/actions/setup-r@v1 | |
| with: | |
| install-r: false | |
| - name: Install dependencies | |
| run: remotes::install_deps(dependencies = TRUE, upgrade = FALSE) | |
| shell: Rscript {0} | |
| - name: Check | |
| run: rcmdcheck::rcmdcheck(args = "--no-manual", error_on = "error") | |
| shell: Rscript {0} |