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GREEN-VARAN v1.3.3

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@edg1983 edg1983 released this 03 Sep 09:05

This release enhances compatibility for consequence annotation fields.

The tool now parses the expected annotation format directly from the VCF header as long as the description of the field contains a format: field1|field2|... or xxx: field1|field2|... structure.

This ensures support for annotations added by popular tools like SnpEff, bcftools csq, and VEP (solves #17), and it can also accommodate any other annotation as long as the schema is parsable from the header.

A new test file is also provided in the test folder containing all 3 fields (ANN, BCSQ, CSQ).

Additional minor improvements to greendb_query.

Grab the pre-compiled binary to get the new release.