Skip to content

Commit

Permalink
Update README.md
Browse files Browse the repository at this point in the history
  • Loading branch information
Finnem authored Mar 17, 2022
1 parent 76197f8 commit 437cc6d
Showing 1 changed file with 2 additions and 2 deletions.
4 changes: 2 additions & 2 deletions README.md
Original file line number Diff line number Diff line change
Expand Up @@ -45,14 +45,14 @@ A report about the chosen assignments for every metabolite can be generated with
As an example we can look at all metabolites for which no or incomplete information was available with:
```
import pandas as pd
df = balancer.generate_metabolite_report(f"{model.id}_metaoblites")
df = balancer.generate_metabolite_report(f"{model.id}_metabolites")
pd.set_option('display.max_rows', None) # displays entire DF, takes a while
df[df["Inferrence Type"] != "Clean"]
```

Or at those metabolites where the assignment now differs from the original model with:
```
df = balancer.generate_metabolite_report(f"{model.id}_metaoblites")
df = balancer.generate_metabolite_report(f"{model.id}_metabolites")
pd.set_option('display.max_rows', None) # displays entire DF, takes a while
df[df["Similarity"] != "Same"]
```
Expand Down

0 comments on commit 437cc6d

Please sign in to comment.