v0.5.0-rc.8

Right, maybe this will be the final RC. Compared to the last one, this mostly just refreshes our dependencies and hotfixes a few issues introduced in previous release candidates.

What's Changed

• CI build time and fork compatibility improvements by @ml-evs in #833
• Tweak cache usage on docker builds by @ml-evs in #841
• Repackage server as proper Python package, removing pipenv by @ml-evs in #604
• Re-enable dependabot for Python dependencies by @ml-evs in #845
• Remove release workflow now that versions are dynamic by @ml-evs in #847
• Bump the github-actions group with 3 updates by @dependabot in #846
• Fix docs formatting and update versioning scheme by @ml-evs in #850
• Use uv and deps lockfiles in CI & pre-commit by @ml-evs in #851
• Attempt to configure lockfile-only dependabot strategy by @ml-evs in #853
• Re-attempt to use lockfile-only strategy with dependabot by @ml-evs in #854
• Do not show option to connect accounts in account settings if not configured in server by @ml-evs in #856
• Use node v20 in build, CI and dev environments by @ml-evs in #858
• Let linting settings reflect development usage by @ml-evs in #859
• Add QR code generation and scanning to UI by @ml-evs in #808
• Refactor login components by @ml-evs in #857
• Bump webpack from 5.88.2 to 5.94.0 in /webapp by @dependabot in #863
• Bump elliptic from 6.5.4 to 6.5.7 in /webapp by @dependabot in #837
• Deprecate gpt-3.5-turbo series and handle missing models in chatblock by @ml-evs in #855
• Bump flask-cors from 4.0.1 to 5.0.0 in /pydatalab by @dependabot in #867
• Bump cryptography from 43.0.0 to 43.0.1 in /pydatalab by @dependabot in #871
• Filter out b64-encoded data before sending to LLM by @ml-evs in #870
• Fix deployment config options for new VUE_APP settings by @ml-evs in #874
• Lockfile compatibility by @ml-evs in #873
• Fix QR code warning showing when not required by @ml-evs in #875
• Close database ports by default by @ml-evs in #876
• Add component tests by @BenjaminCharmes in #872
• Add API route to add items to a collection and associated UI by @BenjaminCharmes in #828
• Improving prime Datatable by @BenjaminCharmes in #862
• Fix some issues in the datatable by @BenjaminCharmes in #888
• Update deps lockfiles and use uv sync in CI by @ml-evs in #899
• Add dynamic data table on collection page by @ml-evs in #885
• Hotfix for new e2e test command by @ml-evs in #904
• Fix SelectAll issue in DataTable after search by @BenjaminCharmes in #893
• Add support for XRD files that have indeterminate headers (e.g., diffrac.eva export) by @ml-evs in #905
• Add Collapsible Functionality for Block Warnings by @BenjaminCharmes in #898
• Exclude pydantic from dependabot by @ml-evs in #908
• Bump the python-dependencies-dev group in /pydatalab with 2 updates by @dependabot in #910
• Rearrange dependencies and update navani by @ml-evs in #911
• Re-enable lockfile only mode of dependabot by @ml-evs in #912
• Add dropdown with actions buttons for selected items inside DataTable by @BenjaminCharmes in #902
• Switch Python package to src-layout by @ml-evs in #865
• Update uv.lock file and use --locked in uv sync by @ml-evs in #913
• Refactor ID Validation Logic into Utility Function by @BenjaminCharmes in #896
• Rid ourselves of pipenv, requirements files, dev containers and other unecessary complexity by @ml-evs in #914
• Install datalab as editable inside docker build to make env passing simpler by @ml-evs in #917
• Fix css issues in DynamicDataTable by @BenjaminCharmes in #919
• Update CODEOWNERS by @ml-evs in #922
• Ensure that new collection immutable_id is returned upon creation by @ml-evs in #925
• Use dynamic version number from git tags in webapp by @BenjaminCharmes in #906
• Explcitly set OAUTHLIB_INSECURE_TRANSPORT env var when present in .env by @ml-evs in #928
• Configure coverage for new src-layout by @ml-evs in #929
• Use git version inside app container build by @ml-evs in #930
• Better handle case where block in database is not implemented by app/API by @ml-evs in #931
• Update collection deletion endpoint to also unlink items by @ml-evs in #933
• Set up custom primevue theme by @BenjaminCharmes in #921
• Fix bug where blocks would not be loaded automatically by @ml-evs in #935
• Fix eslint warning in CollectionInformation by @BenjaminCharmes in #934
• Tweak for edit page to allow upload file modal to load correctly by @ml-evs in #937
• Hotfix for file-overwriting from uppy by @ml-evs in #942
• Add scheduled uv lock -U to replace dependabot by @ml-evs in #945
• Bump express from 4.19.2 to 4.21.0 in /webapp by @dependabot in #883
• Tidy up uv workflow after first generated PR by @ml-evs in #947
• Update pillow requirement from ~=10.4 to ~=11.0 in /pydatalab by @dependabot in #949
• Add suggested 'ready-for-review' workaround to checks not running from actions-created PRs by @ml-evs in #959
• Add scheduled yarn upgrade job in CI by @ml-evs in #960
• Fix typo in yarn upgrade workflow by @ml-evs in #961
• Add body to automated yarn upgrade PR by @ml-evs in #962
• yarn upgrade PR should be created as a draft by @ml-evs in #964
• Remove vue/cli as dependency and add missing polyfills by @ml-evs in #957
• Refresh user list after activating a user in admin dashboard by @BenjaminCharmes in #967
• Add e2e JS tests for file upload and block creation by @ml-evs in #968
• Split vue docker build into two stages by @ml-evs in #958
• Rework of the files utilities and endpoints for both app and API by @ml-evs in #943
• Reduces updates frequency to once a week by @BenjaminCharmes in #975
• Update uv.lock with latest dependencies by @github-actions in #946
• Update yarn.lock with latest dependencies by @github-actions in #963
• Stagger fortnightly scheduled uv/yarn updates by @ml-evs in #977
• Fix default MAX_CONTENT_LENGTH setting to 10 GB by @ml-evs in #979
• Fix and streamline attribute lookup in MediaBlock by @ml-evs in #981
• Add timezone consistency across deployments & UI by @ml-evs in #970

New Contributors

• @github-actions made their first contribution in #946

Full Changelog: v0.4.4...v0.5.0-rc.8

v0.5.0-rc.7

Hopefully the final release candidate for 0.5.0! This rc contains several bug fixes and UI tweaks.

What's Changed

• Update CODEOWNERS by @ml-evs in #922
• Ensure that new collection immutable_id is returned upon creation by @ml-evs in #925
• Use dynamic version number from git tags in webapp by @BenjaminCharmes in #906
• Explcitly set OAUTHLIB_INSECURE_TRANSPORT env var when present in .env by @ml-evs in #928
• Configure coverage for new src-layout by @ml-evs in #929
• Use git version inside app container build by @ml-evs in #930
• Better handle case where block in database is not implemented by app/API by @ml-evs in #931
• Update collection deletion endpoint to also unlink items by @ml-evs in #933
• Set up custom primevue theme by @BenjaminCharmes in #921
• Fix bug where blocks would not be loaded automatically by @ml-evs in #935
• Fix eslint warning in CollectionInformation by @BenjaminCharmes in #934
• Tweak for edit page to allow upload file modal to load correctly by @ml-evs in #937

Full Changelog: v0.5.0-rc.6...v0.5.0-rc.7

v0.5.0-rc.6

What's Changed

• Update uv.lock file and use --locked in uv sync by @ml-evs in #913
• Refactor ID Validation Logic into Utility Function by @BenjaminCharmes in #896
• Rid ourselves of pipenv, requirements files, dev containers and other unecessary complexity by @ml-evs in #914
• Install datalab as editable inside docker build to make env passing simpler by @ml-evs in #917
• Fix css issues in DynamicDataTable by @BenjaminCharmes in #919

Full Changelog: v0.5.0-rc.5...v0.5.0-rc.6

v0.5.0-rc.5

What's Changed

• CI build time and fork compatibility improvements by @ml-evs in #833
• Tweak cache usage on docker builds by @ml-evs in #841
• Repackage server as proper Python package, removing pipenv by @ml-evs in #604
• Re-enable dependabot for Python dependencies by @ml-evs in #845
• Remove release workflow now that versions are dynamic by @ml-evs in #847
• Bump the github-actions group with 3 updates by @dependabot in #846
• Fix docs formatting and update versioning scheme by @ml-evs in #850
• Use uv and deps lockfiles in CI & pre-commit by @ml-evs in #851
• Attempt to configure lockfile-only dependabot strategy by @ml-evs in #853
• Re-attempt to use lockfile-only strategy with dependabot by @ml-evs in #854
• Do not show option to connect accounts in account settings if not configured in server by @ml-evs in #856
• Use node v20 in build, CI and dev environments by @ml-evs in #858
• Let linting settings reflect development usage by @ml-evs in #859
• Add QR code generation and scanning to UI by @ml-evs in #808
• Refactor login components by @ml-evs in #857
• Bump webpack from 5.88.2 to 5.94.0 in /webapp by @dependabot in #863
• Bump elliptic from 6.5.4 to 6.5.7 in /webapp by @dependabot in #837
• Deprecate gpt-3.5-turbo series and handle missing models in chatblock by @ml-evs in #855
• Bump flask-cors from 4.0.1 to 5.0.0 in /pydatalab by @dependabot in #867
• Bump cryptography from 43.0.0 to 43.0.1 in /pydatalab by @dependabot in #871
• Filter out b64-encoded data before sending to LLM by @ml-evs in #870
• Fix deployment config options for new VUE_APP settings by @ml-evs in #874
• Lockfile compatibility by @ml-evs in #873
• Fix QR code warning showing when not required by @ml-evs in #875
• Close database ports by default by @ml-evs in #876
• Add component tests by @BenjaminCharmes in #872
• Add API route to add items to a collection and associated UI by @BenjaminCharmes in #828
• Improving prime Datatable by @BenjaminCharmes in #862
• Fix some issues in the datatable by @BenjaminCharmes in #888
• Update deps lockfiles and use uv sync in CI by @ml-evs in #899
• Add dynamic data table on collection page by @ml-evs in #885
• Hotfix for new e2e test command by @ml-evs in #904
• Fix SelectAll issue in DataTable after search by @BenjaminCharmes in #893
• Add support for XRD files that have indeterminate headers (e.g., diffrac.eva export) by @ml-evs in #905
• Add Collapsible Functionality for Block Warnings by @BenjaminCharmes in #898
• Exclude pydantic from dependabot by @ml-evs in #908
• Bump the python-dependencies-dev group in /pydatalab with 2 updates by @dependabot in #910
• Rearrange dependencies and update navani by @ml-evs in #911
• Re-enable lockfile only mode of dependabot by @ml-evs in #912
• Add dropdown with actions buttons for selected items inside DataTable by @BenjaminCharmes in #902
• Switch Python package to src-layout by @ml-evs in #865

Full Changelog: v0.4.4...v0.5.0-rc.5

v0.5.0-rc.4

What's Changed

• CI build time and fork compatibility improvements by @ml-evs in #833
• Tweak cache usage on docker builds by @ml-evs in #841
• Repackage server as proper Python package, removing pipenv by @ml-evs in #604
• Re-enable dependabot for Python dependencies by @ml-evs in #845
• Remove release workflow now that versions are dynamic by @ml-evs in #847
• Bump the github-actions group with 3 updates by @dependabot in #846
• Fix docs formatting and update versioning scheme by @ml-evs in #850
• Use uv and deps lockfiles in CI & pre-commit by @ml-evs in #851
• Attempt to configure lockfile-only dependabot strategy by @ml-evs in #853
• Re-attempt to use lockfile-only strategy with dependabot by @ml-evs in #854
• Do not show option to connect accounts in account settings if not configured in server by @ml-evs in #856
• Use node v20 in build, CI and dev environments by @ml-evs in #858
• Let linting settings reflect development usage by @ml-evs in #859
• Add QR code generation and scanning to UI by @ml-evs in #808
• Refactor login components by @ml-evs in #857
• Bump webpack from 5.88.2 to 5.94.0 in /webapp by @dependabot in #863
• Bump elliptic from 6.5.4 to 6.5.7 in /webapp by @dependabot in #837
• Deprecate gpt-3.5-turbo series and handle missing models in chatblock by @ml-evs in #855
• Bump flask-cors from 4.0.1 to 5.0.0 in /pydatalab by @dependabot in #867
• Bump cryptography from 43.0.0 to 43.0.1 in /pydatalab by @dependabot in #871
• Filter out b64-encoded data before sending to LLM by @ml-evs in #870
• Fix deployment config options for new VUE_APP settings by @ml-evs in #874
• Lockfile compatibility by @ml-evs in #873
• Fix QR code warning showing when not required by @ml-evs in #875
• Close database ports by default by @ml-evs in #876

Full Changelog: v0.4.4...v0.5.0-rc.4

v0.5.0-rc.3

What's Changed

• CI build time and fork compatibility improvements by @ml-evs in #833
• Tweak cache usage on docker builds by @ml-evs in #841
• Repackage server as proper Python package, removing pipenv by @ml-evs in #604
• Re-enable dependabot for Python dependencies by @ml-evs in #845
• Remove release workflow now that versions are dynamic by @ml-evs in #847
• Bump the github-actions group with 3 updates by @dependabot in #846
• Fix docs formatting and update versioning scheme by @ml-evs in #850
• Use uv and deps lockfiles in CI & pre-commit by @ml-evs in #851
• Attempt to configure lockfile-only dependabot strategy by @ml-evs in #853
• Re-attempt to use lockfile-only strategy with dependabot by @ml-evs in #854
• Do not show option to connect accounts in account settings if not configured in server by @ml-evs in #856
• Use node v20 in build, CI and dev environments by @ml-evs in #858
• Let linting settings reflect development usage by @ml-evs in #859
• Add QR code generation and scanning to UI by @ml-evs in #808
• Refactor login components by @ml-evs in #857
• Bump webpack from 5.88.2 to 5.94.0 in /webapp by @dependabot in #863
• Bump elliptic from 6.5.4 to 6.5.7 in /webapp by @dependabot in #837
• Deprecate gpt-3.5-turbo series and handle missing models in chatblock by @ml-evs in #855
• Bump flask-cors from 4.0.1 to 5.0.0 in /pydatalab by @dependabot in #867
• Bump cryptography from 43.0.0 to 43.0.1 in /pydatalab by @dependabot in #871
• Filter out b64-encoded data before sending to LLM by @ml-evs in #870
• Fix deployment config options for new VUE_APP settings by @ml-evs in #874
• Lockfile compatibility by @ml-evs in #873
• Fix QR code warning showing when not required by @ml-evs in #875

Full Changelog: v0.4.4...v0.5.0-rc.3

v0.5.0-rc.2

What's Changed

• CI build time and fork compatibility improvements by @ml-evs in #833
• Tweak cache usage on docker builds by @ml-evs in #841
• Repackage server as proper Python package, removing pipenv by @ml-evs in #604
• Re-enable dependabot for Python dependencies by @ml-evs in #845
• Remove release workflow now that versions are dynamic by @ml-evs in #847
• Bump the github-actions group with 3 updates by @dependabot in #846
• Fix docs formatting and update versioning scheme by @ml-evs in #850
• Use uv and deps lockfiles in CI & pre-commit by @ml-evs in #851
• Attempt to configure lockfile-only dependabot strategy by @ml-evs in #853
• Re-attempt to use lockfile-only strategy with dependabot by @ml-evs in #854
• Do not show option to connect accounts in account settings if not configured in server by @ml-evs in #856
• Use node v20 in build, CI and dev environments by @ml-evs in #858
• Let linting settings reflect development usage by @ml-evs in #859
• Add QR code generation and scanning to UI by @ml-evs in #808
• Refactor login components by @ml-evs in #857
• Bump webpack from 5.88.2 to 5.94.0 in /webapp by @dependabot in #863
• Bump elliptic from 6.5.4 to 6.5.7 in /webapp by @dependabot in #837
• Deprecate gpt-3.5-turbo series and handle missing models in chatblock by @ml-evs in #855

Full Changelog: v0.4.4...v0.5.0-rc.2

v0.4.4

This release primarily contains some bugfixes for the echem block, as well as tidying in preparation of the next release.

What's Changed

• Removed unused css by @BenjaminCharmes in #826
• Remove final mentions of odbx.science by @ml-evs in #827
• Add routes for resolving items by refcode by @ml-evs in #807
• Fix block errors caused by seemingly defunct theme options in bokeh by @ml-evs in #829
• Update to latest navani version, fixing Neware normalisation issues by @ml-evs in #836
• Reload echem data by default, unless disabled by @ml-evs in #840

Full Changelog: v0.4.3...v0.4.4

v0.4.3

This release simply tweaks some testing and release procedures.

What's Changed

• Re-enable Firefox e2e tests by @ml-evs in #711
• Try to group cypress tests in same run by @ml-evs in #825

Full Changelog: v0.4.2...v0.4.3

v0.4.2

This release adds an update to the batch item creation UI to include other item types, and includes a new preview of the tabular UI which can be accessed at the path /next, as well as several UI tweaks and fixes.

What's Changed

• Rebrand repo to the group-agnostic gh organisation by @ml-evs in #809
• Change docker compose restart policy to "unless-stopped" by @ml-evs in #810
• Update INSTALL.md by @jdbocarsly in #816
• Fix logo link taking full screen width by @ml-evs in #821
• Improve sample table component by @BenjaminCharmes in #784
• Add simple component test for ChemFormInput by @ml-evs in #743
• Add ability to add batch of cells by @jdbocarsly in #797
• Add config options to automatically activate accounts from GitHub, email or any auth source by @ml-evs in #822
• Bump version number to 0.4.2 by @ml-evs in #824

Full Changelog: v0.4.1...v0.4.2