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Changed region_no to number of regions in statistics
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khoroshevskyi committed Oct 17, 2024
1 parent 33532fd commit cd9a40c
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Showing 2 changed files with 2 additions and 2 deletions.
2 changes: 1 addition & 1 deletion bedboss/bedstat/tools/regionstat.R
Original file line number Diff line number Diff line change
Expand Up @@ -387,7 +387,7 @@ doItAall <- function(query, fileId, genome, cellMatrix) {
} else {
bedmeta = list(
name=fileId,
regions_no=length(query),
number_of_regions=length(query),
mean_region_width=ifelse(exists('widths'), signif(mean(widths), digits = 4), NA),
md5sum=opt$digest
)
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2 changes: 1 addition & 1 deletion requirements/requirements-all.txt
Original file line number Diff line number Diff line change
Expand Up @@ -5,7 +5,7 @@ peppy>=0.40.7
yacman>=0.8.4
requests>=2.28.2
piper>=v0.14.3
bbconf>=0.7.0
bbconf>=0.8.0
# bbconf @ git+https://github.com/databio/bbconf.git@dev#egg=bbconf
refgenconf>=0.12.2
pandas>=2.0.0
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