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Issues: centre-for-microbiome-research/GroopM

22 Open 12 Closed
22 Open 12 Closed
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Issues list

How do i install this?
#39 opened Sep 5, 2022 by jvollme
1
OSError: Not a gzipped file (b'co')
#38 opened Jan 19, 2021 by Huangpq2019
GroopM error
#37 opened Nov 25, 2020 by pbravakos
Has the "recruiting" step been removed from groopm2?
#35 opened Jan 14, 2019 by jvollme
GroopM2 ImportError: No module named tempdir
#34 opened Nov 27, 2018 by kmin940
6
With forked timbalam/GroopM: stream_ext module not found
#32 opened Mar 23, 2018 by transcript
3
Error with PyTables Dependency Still Causing Problems
#30 opened Dec 14, 2017 by Roli-Wilhelm
2
Unexpected error: <type 'exceptions.FloatingPointError'> while running GroopM core
#29 opened Dec 3, 2017 by bastian-wur
1
explicit versions pytables=3.1.1 & numexpr=2.3.1 required as dependencies
#28 opened Jun 22, 2017 by jvollme
please provide release (tag)
#27 opened May 17, 2017 by EricDeveaud
Error using groopm explore
#26 opened Mar 1, 2017 by ghost
Error in creating the db.gm: "Distance matrix 'X' must be symmetric."
#25 opened Jan 16, 2017 by BioAlgs
1
Installation and pytables
#24 opened Aug 9, 2016 by linsalrob
1
groopm parse fails with "Distance matrix 'X' must be symmetric"
#23 opened Jul 6, 2016 by fungs
13
GroopM parse issue: Random alignment retrieval only works for indexed files
#22 opened Jun 23, 2016 by sturne29
2
GroopM Core -stops
#21 opened May 28, 2016 by maria-456
3
Error while using groopm core
#19 opened Jan 26, 2016 by mchaib
5
Error with parsing groopM
#18 opened Dec 3, 2015 by s1081289
4
negative dimensions error in groopm core
#13 opened Aug 16, 2015 by koadman
7
Error in reading in Bam files is groopm parse
#9 opened Feb 10, 2015 by jenmobberley
1
IndexError while building database using groopm parse
#8 opened Jan 8, 2015 by dburkhardt
12
Error upgrading groopM DB
#7 opened Dec 26, 2014 by ctSkennerton
ProTip! Find all open issues with in progress development work with linked:pr.