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Merge pull request #43 from catalystneuro/remove_ignore_timestamps_er…
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…rors_flag

Remove `ignore_timestamps_errors` flag
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CodyCBakerPhD authored Oct 24, 2023
2 parents 5646160 + 976b9c8 commit 5f6e5cc
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Showing 2 changed files with 0 additions and 9 deletions.
5 changes: 0 additions & 5 deletions src/tye_lab_to_nwb/ast_ecephys/convert_session.py
Original file line number Diff line number Diff line change
Expand Up @@ -3,9 +3,6 @@
from typing import Optional, Dict
from warnings import warn

from importlib.metadata import version
from packaging.version import Version

from nwbinspector import inspect_nwb
from nwbinspector.inspector_tools import format_messages, save_report

Expand Down Expand Up @@ -63,8 +60,6 @@ def session_to_nwb(

# Add Recording
recording_source_data = dict(folder_path=str(ecephys_recording_folder_path), stream_name="Signals CH")
if Version(version("neo")) > Version("0.12.0"):
recording_source_data.update(ignore_timestamps_errors=True)

source_data.update(dict(Recording=recording_source_data))
conversion_options.update(dict(Recording=dict(stub_test=stub_test)))
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Original file line number Diff line number Diff line change
@@ -1,6 +1,5 @@
"""Primary script to run to convert an entire session for of data using the NWBConverter."""
import traceback
from importlib.metadata import version
from pathlib import Path
from typing import Optional, Dict
from warnings import warn
Expand All @@ -15,7 +14,6 @@
)
from nwbinspector import inspect_nwbfile
from nwbinspector.inspector_tools import save_report, format_messages
from packaging.version import Version

from tye_lab_to_nwb.neurotensin_valence import NeurotensinValenceNWBConverter

Expand Down Expand Up @@ -74,8 +72,6 @@ def session_to_nwb(
# Add Recording
if ecephys_recording_folder_path:
recording_source_data = dict(folder_path=str(ecephys_recording_folder_path), stream_name="Signals CH")
if Version(version("neo")) > Version("0.12.0"):
recording_source_data.update(ignore_timestamps_errors=True)

source_data.update(dict(Recording=recording_source_data))
conversion_options.update(dict(Recording=dict(stub_test=stub_test)))
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