added commanded voltage descriptions

catalystneuro · May 28, 2024 · 74135bb · 74135bb
1 parent 4bdb25f
commit 74135bb
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Showing 2 changed files with 8 additions and 2 deletions.
diff --git a/frozen_dependencies.txt b/frozen_dependencies.txt
@@ -88,7 +88,7 @@ more-itertools==10.2.0
 multidict==6.0.4
 natsort==8.4.0
 ndx-events==0.2.0
-ndx-fiber-photometry @ git+https://github.com/catalystneuro/ndx-fiber-photometry.git@14e05cda86026db694c1c577918284f435b7ec10
+ndx-fiber-photometry @ git+https://github.com/catalystneuro/ndx-fiber-photometry.git@94d80c2996cf3c71bd7e6f2b2c83f9b3fb9906ff
 ndx-grayscalevolume==0.0.2
 ndx-icephys-meta==0.1.0
 ndx-photometry @ git+https://github.com/catalystneuro/ndx-photometry.git@c1284c91a7e0a5dfd19f84bbf683e17fa607d4ec
@@ -99,7 +99,7 @@ neuroconv @ git+https://github.com/catalystneuro/neuroconv.git@f45e77e1523699164
 nodeenv==1.8.0
 numcodecs==0.11.0
 numpy==1.26.3
-nwbinspector==0.4.35
+-e git+https://github.com/catalystneuro/nwbinspector.git@1f88732833709fc194ec46ebb82b0427137a2825#egg=nwbinspector
 nwbwidgets==0.11.3
 openpyxl==3.1.2
 packaging==23.2

diff --git a/src/lerner_lab_to_nwb/seiler_2024/seiler_2024fiberphotometryinterface.py b/src/lerner_lab_to_nwb/seiler_2024/seiler_2024fiberphotometryinterface.py
@@ -182,6 +182,7 @@ def add_to_nwbfile(
         if has_demodulated_commanded_voltages:
             commanded_voltage_series_dms_calcium_signal = CommandedVoltageSeries(
                 name="commanded_voltage_series_dms_calcium_signal",
+                description="The commanded voltage for the DMS calcium signal.",
                 data=H5DataIO(tdt_photometry.streams["Fi1d"].data[0, :], compression=True),
                 unit="volts",
                 frequency=211.0,
@@ -190,6 +191,7 @@ def add_to_nwbfile(
             )
             commanded_voltage_series_dms_isosbestic_control = CommandedVoltageSeries(
                 name="commanded_voltage_series_dms_isosbestic_control",
+                description="The commanded voltage for the DMS isosbestic control.",
                 data=H5DataIO(tdt_photometry.streams["Fi1d"].data[1, :], compression=True),
                 unit="volts",
                 frequency=330.0,
@@ -198,6 +200,7 @@ def add_to_nwbfile(
             )
             commanded_voltage_series_dls_calcium_signal = CommandedVoltageSeries(
                 name="commanded_voltage_series_dls_calcium_signal",
+                description="The commanded voltage for the DLS calcium signal.",
                 data=H5DataIO(tdt_photometry.streams["Fi1d"].data[3, :], compression=True),
                 unit="volts",
                 frequency=450.0,
@@ -206,6 +209,7 @@ def add_to_nwbfile(
             )
             commanded_voltage_series_dls_isosbestic_control = CommandedVoltageSeries(
                 name="commanded_voltage_series_dls_isosbestic_control",
+                description="The commanded voltage for the DLS isosbestic control.",
                 data=H5DataIO(tdt_photometry.streams["Fi1d"].data[2, :], compression=True),
                 unit="volts",
                 frequency=270.0,
@@ -215,13 +219,15 @@ def add_to_nwbfile(
         else:
             commanded_voltage_series_dms = CommandedVoltageSeries(
                 name="commanded_voltage_series_dms",
+                description="The commanded voltage for the frequency-modulated DMS calcium signal and DMS isosbestic control.",
                 data=H5DataIO(tdt_photometry.streams["Fi1r"].data[0, :], compression=True),
                 unit="volts",
                 starting_time=0.0,
                 rate=tdt_photometry.streams["Fi1r"].fs,
             )
             commanded_voltage_series_dls = CommandedVoltageSeries(
                 name="commanded_voltage_series_dls",
+                description="The commanded voltage for the frequency-modulated DLS calcium signal and DLS isosbestic control.",
                 data=H5DataIO(tdt_photometry.streams["Fi1r"].data[1, :], compression=True),
                 unit="volts",
                 starting_time=0.0,