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Geomics and Bioinformatics Hub

Code repository for the Genomics and Bioinformatics Hub at Harvard Medical School and Brigham and Women's Hospital

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  1. Rshiny_PowerAnalysis Rshiny_PowerAnalysis Public

    Code for the powerEQTL R shiny application (https://xiaoqil.shinyapps.io/powerEQTL/)

    R 1

  2. CircRNA-Mapping CircRNA-Mapping Public

    Common Workflow Language 1 1

  3. Single-cell-RNA-seq-of-the-CRISPR-engineered-endogenous-tauopathy-model Single-cell-RNA-seq-of-the-CRISPR-engineered-endogenous-tauopathy-model Public

    Scripts for Hassan 2022 scRNA-seq data analysis

    Jupyter Notebook 1

  4. NGS_workflow_RNAseq NGS_workflow_RNAseq Public

    Pipeline for RNAseq data analysis

  5. STAT_powerAnalysis STAT_powerAnalysis Public

    All about power analysis

  6. kent kent Public

    Forked from ucscGenomeBrowser/kent

    UCSC Genome Browser source tree. Stable branch: "beta".

    C

Repositories

Showing 10 of 24 repositories
  • qcreporter Public
    bwh-bioinformatics-hub/qcreporter’s past year of commit activity
    R 0 0 0 0 Updated Nov 20, 2023
  • Single-cell-RNA-seq-of-the-CRISPR-engineered-endogenous-tauopathy-model Public

    Scripts for Hassan 2022 scRNA-seq data analysis

    bwh-bioinformatics-hub/Single-cell-RNA-seq-of-the-CRISPR-engineered-endogenous-tauopathy-model’s past year of commit activity
    Jupyter Notebook 1 0 0 0 Updated Sep 22, 2023
  • scATAC_Seq_Pipeline Public
    bwh-bioinformatics-hub/scATAC_Seq_Pipeline’s past year of commit activity
    R 0 0 0 0 Updated Aug 22, 2023
  • scATAC_Nextflow Public
    bwh-bioinformatics-hub/scATAC_Nextflow’s past year of commit activity
    Shell 0 0 0 0 Updated Aug 17, 2023
  • nextflow-scRNAseq Public

    Nextflow for single-cell RNAseq

    bwh-bioinformatics-hub/nextflow-scRNAseq’s past year of commit activity
    R 0 0 0 0 Updated Jul 25, 2023
  • Hallacli2022Cell Public

    Bioinformatics code repository for Hallacli et al. Cell 2022

    bwh-bioinformatics-hub/Hallacli2022Cell’s past year of commit activity
    R 0 0 0 0 Updated Jul 21, 2023
  • H5MANIPULATOR Public
    bwh-bioinformatics-hub/H5MANIPULATOR’s past year of commit activity
    R 0 0 0 0 Updated May 23, 2023
  • nextflow_demo Public

    Demo of a Nextflow Pipeline for bulk-RNA Seq

    bwh-bioinformatics-hub/nextflow_demo’s past year of commit activity
    Nextflow 0 0 0 0 Updated May 18, 2023
  • AI2AMP-PD Public
    bwh-bioinformatics-hub/AI2AMP-PD’s past year of commit activity
    Python 0 0 0 0 Updated Mar 15, 2023
  • nextflow-RNAseq Public

    Nextflow pipeline for RNAseq analysis

    bwh-bioinformatics-hub/nextflow-RNAseq’s past year of commit activity
    Nextflow 0 0 0 0 Updated Jan 3, 2023
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