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WM-2617: Release WFL 0.20.3 updating GDCWholeGenomeSomaticSingleSampl…
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…e to 1.3.1 (#635)
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cjllanwarne committed May 7, 2024
1 parent b81e6bf commit 8913739
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3 changes: 3 additions & 0 deletions CHANGELOG.md
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# Release 0.20.3
- [WM-2560] Update WDL version of GDCWholeGenomeSomaticSingleSample to 1.3.1 ([#632](https://github.com/broadinstitute/wfl/pull/632))

# Release 0.20.2
- [GH-1695] Fix the "increment BAM version in Clio" again. ([#626](https://github.com/broadinstitute/wfl/pull/626))

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2 changes: 1 addition & 1 deletion api/src/wfl/module/sg.clj
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::all/input_cram]))
(def workflow-wdl
"The top-level WDL file and its version."
{:release "GDCWholeGenomeSomaticSingleSample_v1.3.0"
{:release "GDCWholeGenomeSomaticSingleSample_v1.3.1"
:path "pipelines/broad/dna_seq/somatic/single_sample/wgs/gdc_genome/GDCWholeGenomeSomaticSingleSample.wdl"})

(defn ^:private cromwell->strings
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3 changes: 2 additions & 1 deletion api/test/resources/datasets/illumina-genotyping-array.json
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}
}
]
}
},
"dedicatedIngestServiceAccount": false
}
3 changes: 2 additions & 1 deletion api/test/resources/datasets/testing-dataset.json
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}
}
]
}
},
"dedicatedIngestServiceAccount": false
}
6 changes: 4 additions & 2 deletions api/test/wfl/integration/firecloud_test.clj
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(def entity-set-type (str (first entity) "_set"))

;; A manually-triggered submission and its workflow
(def submission-id "454df415-e349-4929-b8e2-4f56661f0446")
(def workflow-id "1e7eb23c-88e9-44a4-878f-b08b75112384")
;; (If this gets archived, a new copy can be resubmitted at
;; https://app.terra.bio/#workspaces/wfl-dev/Illumina-Genotyping-Array/workflows/warp-pipelines/IlluminaGenotypingArray)
(def submission-id "ffdf72b0-6014-4f18-9c35-18eab21ac049")
(def workflow-id "1a1c8089-9d84-4d85-b104-2be5092a3604")

(deftest test-get-submission
(let [submission (firecloud/get-submission workspace submission-id)]
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2 changes: 1 addition & 1 deletion version
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0.20.2
0.20.3

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