Update for new scipy #48

	name: MMS Test
	on: [push]

	jobs:
	standard_tests:
	name: Tests with ${{ matrix.config.name }}
	timeout-minutes: 60
	runs-on: ubuntu-latest
	container:
	image: oi4ai/bout3d:latest-${{ matrix.config.mode }}
	strategy:
	fail-fast: false
	matrix:
	config:
	- name: debugging
	mode: debug
	- name: optimisations
	mode: opt
	steps:
	- name: Job information
	run: \|
	echo Build: ${{ matrix.config.name }}
	cat /etc/os-release

	- name: Checkout hermes-2
	run: \|
	cd /home/boutuser/
	git clone ${{ github.server_url }}/${{ github.repository }} -b ${{ github.ref_name }} zoidberg
	cd zoidberg
	git checkout ${{ github.sha }}
	git submodule update --init --recursive

	- name: Build
	run: \|
	export HOME=/home/boutuser
	cd /home/boutuser/zoidberg
	python3 -m ensurepip
	python3 -m pip install .
	python3 -m pip install xarray

	- name: Run
	run: \|
	export HOME=/home/boutuser
	export PYTHONPATH=/home/boutuser/BOUT-dev/build/tools/pylib/
	export LD_LIBRARY_PATH=/usr/lib64/mpich/lib
	cd /home/boutuser/zoidberg/test/mms/
	# Run test
	make

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