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Sv figure code #42

# Github action that runs all jupyter notebook after pull request
# Jupyter notebooks will be run in the container/jupyter.Dockerfile
name: render-jupyter-notebook
on:
pull_request:
types:
- opened
- reopened
- edited
jobs:
run_notebooks:
runs-on: ubuntu-latest
steps:
- name: Checkout code
uses: actions/checkout@v4
- name: Build and push Docker image
uses: docker/build-push-action@v5
with:
file: container/jupyter.Dockerfile
context: .
push: false # Set to true if you want to push the image to a registry
tags: notebook-runner
- name: Run Docker container to compile JupyterNotebook
uses: addnab/docker-run-action@v3
with:
image: notebook-runner
options: -v ${{ github.workspace }}:/workspace --rm -u root
run: |
notebooks=$(find /workspace -name "*.ipynb")
if [ -n "$notebooks" ]; then
find /workspace -name "*.ipynb" -exec jupyter nbconvert --to notebook --execute {} \;
else
echo "No Jupyter notebooks found. Skipping execution."
fi
- uses: stefanzweifel/git-auto-commit-action@v5