feat: make flag -A in Longshot optional #112
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RenanWA
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This PR adds a new flag to
artic minion, allowing the user to choose whether or not to use flag-A(--auto_max_cov) when runninglongshot.By default, the flag
-Ais used, so that current behavior remains unchanged upon updating. When setting--no-auto_max_cov, the call tolongshotis made without flag-A.This change closes issue #91.