Fix, update and automate generation of detailed_gene and summary_gene tables #2 #914
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pfpjs
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Great work! I just checked the updated gene tables on google drive, but the HGNC names seem to not have been updated yet, i.e. they do not match the table downloaded from HGNC in |
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My previous PR was getting Ensembl gene info from GRCh38 instead of GRCh37, this fixes that.
The column
transcript_tsl/transcript_statuswas changed totranscript_gencode_basic- more info here.Updated generated
detailed_gene_table_v95andsummary_gene_table_v95can be found here: https://drive.google.com/drive/u/0/folders/1q5geCRd0EPqGJcJQ0j2D_V0IO7Z0Q3vqApologies for the oversight regarding GRCh37 vs. GRCh38, I'm always bugging people to check genome build versions, and now it was my turn to get burned!
Addresses #902 and #912.