Fix pandas read #215

	# This workflow will install Python dependencies,
	# run tests and lint with a variety of Python versions/

	name: Tests

	on:
	push:
	branches: ["main"]
	pull_request:
	branches: ["main"]

	jobs:
	build:

	runs-on: ubuntu-latest
	strategy:
	fail-fast: false
	matrix:
	python-version: ["3.10", "3.11"]

	steps:
	- uses: actions/checkout@v3

	- name: Cache test data
	uses: actions/cache@v3
	with:
	path: src/scope/data
	key: ${{ runner.os }}-test-data-${{ hashFiles('**/test-data-hash') }}
	restore-keys: \|
	${{ runner.os }}-test-data-
	- name: Download test data if not cached
	if: steps.cache-test-data.outputs.cache-hit != 'true'
	run: \|
	echo "Downloading test data..."
	cd src/scope
	chmod +x download_data.bash
	./download_data.bash
	cd ../../


	- name: Set up Python ${{ matrix.python-version }}
	uses: actions/setup-python@v3
	with:
	python-version: ${{ matrix.python-version }}
	- name: Install dependencies
	run: \|
	python3 -m pip install -U pip
	python3 -m pip install -U setuptools setuptools_scm pep517
	python3 -m pip install -e .


	- name: Run tests
	run: \|
	pip install pytest
	pip install pytest-cov
	export NUMBA_DISABLE_JIT=1
	pytest --cov=src/scope --cov-report=xml

	- name: Upload coverage reports to Codecov
	uses: codecov/codecov-action@v3
	env:
	CODECOV_TOKEN: ${{ secrets.CODECOV_TOKEN }}
	with:
	directory: ./coverage/reports/
	env_vars: OS,PYTHON
	fail_ci_if_error: true
	files: ./coverage.xml
	flags: unittests
	name: codecov-umbrella
	path_to_write_report: ./coverage/codecov_report.txt
	verbose: true

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