Build IG #301
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| name: Build IG | |
| on: | |
| schedule: | |
| - cron: '00 4,10,15 * * *' | |
| workflow_call: | |
| workflow_dispatch: | |
| # The following jobs are equal for all IGs and can be moved to a common composite-action if 'uses'-support is added, see: | |
| # https://github.com/actions/runner/blob/main/docs/adrs/1144-composite-actions.md | |
| jobs: | |
| publish: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v3 | |
| #- uses: actions/setup-java@v3 | |
| # with: | |
| # distribution: 'oracle' | |
| # java-version: '17' | |
| - name: Setup Python # Set Python version | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: '3.10' | |
| - name: Install rename | |
| run : sudo apt install rename | |
| - name: Get From site esante | |
| run: | | |
| #Creation des répertoires d'init | |
| #mkdir ./input/images/NOS/ | |
| mkdir ./input/NOS | |
| #Recuperation des NOS en json | |
| wget -q https://esante.gouv.fr/sites/default/files/media_entity/documents/NOS-Fichiers_Publics-Versions_json_fhir.zip | |
| unzip NOS-Fichiers_Publics-Versions_json_fhir.zip -d ./input/NOS | |
| #Suppression des fichiers en erreur | |
| rm ./input/NOS/TRE_R13-Commune-FHIR.json | |
| rm ./input/NOS/ASS_X12-CommuneDeptRegionOM-FHIR.json | |
| rm ./input/NOS/JDV_J120-CommuneHistorisee-FHIR.json | |
| rm ./input/NOS/JDV_J124-Commune-FHIR.json | |
| #rm ./input/NOS/ASS_A11-CorresModeleCDA-XdsFormatCode-CISIS-FHIR.json | |
| #rm ./input/NOS/ASS_X16-CorrespondanceType-Classe-DMP-FHIR.json | |
| rm ./input/NOS/JDV_J151-BodySiteBodyTemperature-ENS-FHIR.json | |
| rm ./input/NOS/ASS_* | |
| - name: 📥 Download test tools | |
| run: | | |
| wget -q https://github.com/hapifhir/org.hl7.fhir.core/releases/latest/download/validator_cli.jar | |
| - name: ✔️ Run tests | |
| run: java -Xmx8192m -jar validator_cli.jar ./input/NOS/TRE_R* -recurse -output-style compact -output rapport.html | |
| continue-on-error: true | |
| # Downloads the newest version of the IG Publisher, this could probable be cached. | |
| - name: 📥 Download IG Publisher | |
| run: wget -q https://github.com/HL7/fhir-ig-publisher/releases/latest/download/publisher.jar | |
| - name: Install modules | |
| run: npm install -g fsh-sushi | |
| - name: Build and test with Rake | |
| run: | | |
| sudo apt-get install ruby-full | |
| sudo gem install jekyll | |
| - name: Run sushi | |
| run: sushi . | |
| # Builds the HTML page for the IG. | |
| - name: 🏃♂️ Run IG Publisher | |
| run : java -Xmx8192m -jar publisher.jar publisher -ig . | |
| - name: Generate list using Markdown | |
| run: | | |
| echo "### Rapport de validation (validator_cli) :rocket:" >> $GITHUB_STEP_SUMMARY | |
| cat rapport.html >> $GITHUB_STEP_SUMMARY | |
| - name: Get From site esante | |
| run: | | |
| #Recuperation des fichier .json | |
| wget -q https://esante.gouv.fr/sites/default/files/media_entity/documents/NOS-Fichiers_Publics-Versions_json_fhir.zip | |
| cp NOS-Fichiers_Publics-Versions_json_fhir.zip ./output/NOS | |
| unzip NOS-Fichiers_Publics-Versions_json_fhir.zip -d ./output/NOS | |
| #Recucperation des fichiers .tabs | |
| wget -q https://esante.gouv.fr/sites/default/files/media_entity/documents/NOS-Fichiers_Publics.zip | |
| cp NOS-Fichiers_Publics.zip ./output/NOS/ | |
| unzip NOS-Fichiers_Publics.zip -d ./output/NOS | |
| #Recupération des fichiers SVS | |
| wget -q https://esante.gouv.fr/sites/default/files/media_entity/documents/NOS-Fichiers_Publics-Versions_xml_svs.zip | |
| cp NOS-Fichiers_Publics-Versions_xml_svs.zip ./output/NOS | |
| unzip NOS-Fichiers_Publics-Versions_xml_svs.zip -d ./output/NOS | |
| #Recupération des fichiers xml Fhir | |
| wget -q https://esante.gouv.fr/sites/default/files/media_entity/documents/nos-fichiers_publics-versions_xml_fhir.zip | |
| cp nos-fichiers_publics-versions_xml_fhir.zip ./output/NOS | |
| unzip nos-fichiers_publics-versions_xml_fhir.zip -d ./output/NOS | |
| #Recuperation des fichiers PDF | |
| wget -q https://esante.gouv.fr/sites/default/files/media_entity/documents/NOS-Fichiers_Publics_JDV-Versions_pdf.zip | |
| cp NOS-Fichiers_Publics_JDV-Versions_pdf.zip ./output/NOS | |
| unzip NOS-Fichiers_Publics_JDV-Versions_pdf.zip -d ./output/NOS | |
| wget -q https://esante.gouv.fr/sites/default/files/media_entity/documents/NOS-Fichiers_Publics_TRE_ASS-Versions_pdf.zip | |
| cp NOS-Fichiers_Publics_TRE_ASS-Versions_pdf.zip ./output/NOS | |
| unzip NOS-Fichiers_Publics_TRE_ASS-Versions_pdf.zip -d ./output/NOS | |
| - name: Rename TRE | |
| run : rename -v 's/TRE_/CodeSystem-TRE-/' ./output/NOS/* | |
| - name: Rename JDV | |
| run : rename -v 's/JDV_/ValueSet-JDV-/' ./output/NOS/* | |
| - name: 1 ZIP JDV PDF | |
| run : zip -rj ./output/NOS/NOS-jdv-pdf.zip ./output/NOS/*JDV-*.pdf | |
| - name: 1 ZIP JDV SVS | |
| run : zip -rj ./output/NOS/NOS-jdv-svs.zip ./output/NOS/*JDV-*.xml -x "*FHIR*" | |
| - name: 1 ZIP JDV FHIR JSON | |
| run : zip -rj ./output/NOS/NOS-jdv-fhir-json.zip ./output/NOS/*JDV-*-FHIR.json | |
| - name: 1 ZIP JDV FHIR XML | |
| run : zip -rj ./output/NOS/NOS-jdv-fhir-xml.zip ./output/NOS/*JDV-*-FHIR.xml | |
| - name: 1 ZIP JDV FHIR tabs | |
| run : zip -rj ./output/NOS/NOS-jdv-tabs.zip ./output/NOS/*JDV-*.tabs | |
| - name: 2 ZIP TRE PDF | |
| run : zip -rj ./output/NOS/NOS-tre-pdf.zip ./output/NOS/*TRE-*.pdf | |
| - name: 2 ZIP TRE SVS | |
| run : zip -rj ./output/NOS/NOS-tre-svs.zip ./output/NOS/*TRE*.xml -x "*FHIR*" | |
| - name: 2 ZIP TRE FHIR JSON | |
| run : zip -rj ./output/NOS/NOS-tre-fhir-json.zip ./output/NOS/*TRE*-FHIR.json | |
| - name: 2 ZIP TRE FHIR XML | |
| run : zip -rj ./output/NOS/NOS-tre-fhir-xml.zip ./output/NOS/*TRE*-FHIR.xml | |
| - name: 2 ZIP TRE FHIR tabs | |
| run : zip -rj ./output/NOS/NOS-tre-tabs.zip ./output/NOS/*TRE*.tabs | |
| - name: 3 ZIP ASS PDF | |
| run : zip -rj ./output/NOS/NOS-ass-pdf.zip ./output/NOS/ASS_*.pdf | |
| - name: 3 ZIP ASS SVS | |
| run : zip -rj ./output/NOS/NOS-ass-svs.zip ./output/NOS/ASS*.xml -x "*FHIR*" | |
| - name: 3 ZIP ASS FHIR JSON | |
| run : zip -rj ./output/NOS/NOS-ass-fhir-json.zip ./output/NOS/ASS*-FHIR.json | |
| - name: 3 ZIP ASS FHIR XML | |
| run : zip -rj ./output/NOS/NOS-ass-fhir-xml.zip ./output/NOS/ASS*-FHIR.xml | |
| - name: 3 ZIP ASS FHIR tabs | |
| run : zip -rj ./output/NOS/NOS-ass-tabs.zip ./output/NOS/ASS*.tabs | |
| - name: ZIP Ensemble des NOS au format CSV | |
| run : zip -rj ./output/NOS/NOS-Fichiers_Publics.zip ./output/NOS/*.tabs | |
| - name: ZIP Ensemble des NOS au format XML/SVS | |
| run : zip -rj ./output/NOS/NOS-Fichiers_Publics-Versions_xml_svs.zip ./output/NOS/*.xml -x "*FHIR*" | |
| - name: ZIP Ensemble des NOS au format JSON/FHIR (ZIP) | |
| run : zip -rj ./output/NOS/NOS-Fichiers_Publics-Versions_json_fhir.zip ./output/NOS/*-FHIR.json | |
| #- name: ZIP Ensemble des NOS au format XML/FHIR (ZIP) | |
| # run : zip -rj ./output/NOS/Nos-fichiers_publics-versions_xml_fhir.zip ./output/NOS/*-FHIR.xml | |
| - name: ZIP Jeux de valeurs du CI-SIS (ZIP | |
| run : zip -rj ./output/NOS/NOS-Jeux_de_Valeurs_CI-SIS.zip ./output/NOS/*CISIS* | |
| - name: Get branch names | |
| id: branch-name | |
| uses: tj-actions/[email protected] | |
| # Publishes the HTML page to a seperate branch in order to host it using GitHub-Pages. | |
| # This will overwrite the currently published HTML page. | |
| - name: 🚀 Deploy to GitHub-Pages | |
| uses: peaceiris/actions-gh-pages@v3 | |
| with: | |
| github_token: ${{ secrets.GITHUB_TOKEN }} | |
| publish_dir: ./output | |
| exclude_assets: '**ig.zip.zip,**CodeSystem-TRE-R13-CommuneOM.xml.html**' | |
| destination_dir: ig/${{ steps.branch-name.outputs.current_branch }} | |
| commit_message: ' ${{ github.event.head_commit.message }}' |