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1. atom2protein atom2protein Public

   Protein structure machinery for informatics and individual structure analysis (work in progress)

   Python 1

2. fjarrsyn fjarrsyn Public

   Agent-based modelling (ABM) library with networked agents and complex agents with sensors, actuators and beliefs. Note: the library is not yet ready for production, lacking documentation and unit t…

   Python

3. monkey_caput monkey_caput Public

   Custom PyTorch model (VGG-16 Auto-Encoder) and custom criterion (Local Aggregation) for image clustering. The repo contains elaborated creation of fungi image data using factory method.

   Python 38 17

4. london_bike_forecast london_bike_forecast Public

   Graph convolutional neural network for forecasting traffic in the London bike-share system, where the graph convolutions pass spatial information between stations, and one-dimensional convolutions …

   Python 6 5

5. viral-bikers viral-bikers Public

   Scripts for analysis of bike-share data from Taipei and London, plus Bokeh data visualizations. See blog article for outcomes: https://towardsdatascience.com/responses-to-covid-19-in-taipei-and-lon…

   Jupyter Notebook 1

6. viral_spread_network viral_spread_network Public

   Basic classes for simulation of viral spread in contact graph

   Python