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use an older R version + add remaining packages
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akochari authored Jun 25, 2024
1 parent 8e715a7 commit 290b281
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4 changes: 2 additions & 2 deletions Dockerfile
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FROM rocker/shiny:latest
FROM rocker/shiny:4.1.2

RUN apt-get update && \
apt-get upgrade -y && \
Expand All @@ -7,7 +7,7 @@ RUN apt-get update && \
rm -rf /var/lib/apt/lists/*

# Command to install standard R packages from CRAN; enter the list of required packages for your app here
RUN Rscript -e 'install.packages(c("shiny","tidyverse","BiocManager", "caret", "mlr", "xgboost", "shinythemes", "DT"))'
RUN Rscript -e 'install.packages(c("shiny","tidyverse","BiocManager", "caret", "mlr", "xgboost", "shinythemes", "DT", "caret", "recipes"))'

# Command to install packages from Bioconductor; enter the list of required Bioconductor packages for your app here
RUN Rscript -e 'BiocManager::install(c("Biostrings"),ask = F)'
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