v1.1

This release contains minor changes and additions including alternate regularization schemes, and is the version used in the publication "The Generative Capacity of Probabilistic Protein Sequence Models"

Initial Release

This version is described by the publication:

Mi3-GPU: MCMC-based Inverse Ising Inference on GPUs for protein covariation analysis. Allan Haldane, Ronald M. Levy. Computer Physics Communications 2020. https://doi.org/10.1016/j.cpc.2020.107312