SPAdes usecases

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Re-run triggered March 29, 2024 15:17

andrewprzh

#1264

docs

Status Failure

Total duration 15m 4s

Artifacts 1

usecases.yml

on: pull_request

🚧 Build SPAdes

Multicell B.cereus TruSeq 100x

Nextera L.monocytogenes

Contigs E.coli JGI lane 7

Full run M.ruber JGI lane 9

IonTorrent E.coli K12

Mate-pairs B.faecium

Single-cell P.heparinus JGI lane 7

plasmidSPAdes C.callunae

Single reads E.coli Deeptrench

Saves E.coli 100K

Saves E.coli UCSD lane 1

metaSPAdes JGI 150

metaviralSPAdes ERR525599

Annotations

5 errors and 17 warnings

Mate-pairs B.faecium

Process completed with exit code 10.

Full run M.ruber JGI lane 9

Process completed with exit code 10.

Saves E.coli 100K

Process completed with exit code 12.

Multicell B.cereus TruSeq 100x

Process completed with exit code 10.

Saves E.coli UCSD lane 1

Process completed with exit code 12.

🚧 Build SPAdes

Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, actions/upload-artifact@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.

PacBio M.ruber

Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, actions/download-artifact@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.

IonTorrent E.coli K12

Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, actions/download-artifact@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.

Nextera L.monocytogenes

Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, actions/download-artifact@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.

Single-cell P.heparinus JGI lane 7

Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, actions/download-artifact@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.

metaSPAdes JGI 150

Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, actions/download-artifact@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.

metaviralSPAdes ERR525599

Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, actions/download-artifact@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.

Single reads E.coli Deeptrench

Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, actions/download-artifact@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.

Single reads E.coli Deeptrench

Failed to download action 'https://api.github.com/repos/actions/checkout/tarball/f43a0e5ff2bd294095638e18286ca9a3d1956744'. Error: Response status code does not indicate success: 502 (Bad Gateway).

Single reads E.coli Deeptrench

Back off 14.984 seconds before retry.

Mate-pairs B.faecium

Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, actions/download-artifact@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.

Contigs E.coli JGI lane 7

Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, actions/download-artifact@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.

Full run M.ruber JGI lane 9

Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, actions/download-artifact@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.

Saves E.coli 100K

Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, actions/download-artifact@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.

Multicell B.cereus TruSeq 100x

Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, actions/download-artifact@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.

plasmidSPAdes C.callunae

Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, actions/download-artifact@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.

Saves E.coli UCSD lane 1

Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, actions/download-artifact@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.

Artifacts

Produced during runtime

Name	Size
build-artifacts Expired	15.7 MB