Fixed crash of --test!

ablab · Feb 5, 2018 · add0e74 · add0e74
1 parent babc496
commit add0e74
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Showing 2 changed files with 7 additions and 5 deletions.
diff --git a/CHANGES.txt b/CHANGES.txt
@@ -1,10 +1,12 @@
 -- Version history --
 
 4.6.3
-      1. Fixed crash of BSS in MetaQUAST mode (introduced in v4.6.2).
+      1. Fixed crash of quast.py --test (introduced in v4.6.2).
 
-      2. Proper float/integer division in both Python2 and Python3 (
-         affected the number of scaffold gap size misassemblies in Python2).
+      2. Fixed crash of BSS in MetaQUAST mode (introduced in v4.6.2).
+
+      3. Proper float/integer division in both Python2 and Python3 (may affect 
+         the number of scaffold gap size misassemblies in Python2).
 
 
 4.6.2

diff --git a/quast_libs/ca_utils/align_contigs.py b/quast_libs/ca_utils/align_contigs.py
@@ -8,7 +8,7 @@
 from __future__ import with_statement
 
 import os
-from os.path import isfile, basename
+from os.path import isfile, join, basename, dirname
 import datetime
 import shutil
 import sys
@@ -19,7 +19,7 @@
     create_nucmer_output_dir, clean_tmp_files, get_installed_emem, reset_aligner_selection, draw_mummer_plot
 
 from quast_libs.log import get_logger
-from quast_libs.qutils import is_python2, md5
+from quast_libs.qutils import is_python2, md5, safe_create
 
 logger = get_logger(qconfig.LOGGER_DEFAULT_NAME)