README update

ablab · Nov 18, 2015 · 14613ce · 14613ce
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 # basespace_app
-Repo for creating BaseSpace Apps
+Source code for GATK3 Best Practices wrapper.
+
+Docker container with this sources is at https://hub.docker.com/r/gurevich/gatk3_best_practices/
+It is based on ubuntu Docker. Additionally installed (sudo apt-get update):
+* python v2.7 (sudo apt-get install python)
+* java v1.7 (sudo apt-get install openjdk-7-jre-headless)
+* samtools v.0.1.19 (sudo apt-get install samtools)
+* tabix and bgzip (sudo apt-get install tabix)