2.5.2

Versipyify package and expose skip_coverage_plot option to CLI

v2.5.0.23

• Adding multi Fast5 support to Fast5_to_seq_summary #49 thanks to @snajder-r contribution Made Fast5_to_seq_summary work on multi-fast5 files #115
• Add link to @timkahlke tutorial in documentation
• Add bioconda badge

v2.5.0.21

Merge pull request #114 from a-slide/dev

Dev

2.5.0.3

This major update add new functionalities to pycoQC and improve a number of existing ones:

• BAM files parsing
• 8 new alignment specific plots
• Updated json format including alignment information when available
• Option to filter out duplicated reads due to Guppy over-calling (--filter_duplicated)
• New tool to split summary sequencing file by barcodes
• Improve HTML report layout and add list of source files at the end
• Update documentation and demo notebooks
• Add Codacity integration

v2.3.1.6 Stable

This release is mainly a fix for promethion flowcells for which pycoQC used to generate massive report files.
It's much better no, but is the size is still an issue it is recommended to drop out the channel activity plot

v2.2.4 stable

• Rewrite argparse including better handling of input file regex

• Rewrite doc with mkdocs.

• Add methods to generate data dict and json file on top of HTML

• Summary can now optionally split per run_id or barcode

v2.2.3 stable

Minor patch for windows compatibility

v2.2.2 stable

This release include minor text edits for the JOSS paper.
We also added a gitter chatroom

v2.2.1 stable

Minor fixes and improved documentation as part as JOSS submission

v2.2.0 stable

• Fix minor bugs
• Improve documentation
• Update test datasets
• Include draft of paper to be submitted to JOSS