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NOTICE: All program notification/warning messages that appear in STDERR will be also written to log file plates1-53_cnv.log
NOTICE: Reading marker coordinates and population frequency of B allele (PFB) from ../data/plates1-53_cnv/plates1-53_cnv_pfb.txt ... Done with 781390 records (416 records in chr MT were discarded)
NOTICE: Reading LRR and BAF values for from `gunzip -c ../data/plates1-53_cnv/56_14110603_CK24916489G_H07.penncnv.cnv.txt.gz` ... Done with 781390 records in 24 chromosomes (416 records are discarded due to lack of PFB information for the markers)
Error: input to reg_linear() should be two reference to arrays
The program runs fine without including the gcmodel file. What might be causing this error?
The text was updated successfully, but these errors were encountered:
I am trying to use the gcmodel file
/PennCNV-1.0.5/gc_file/hg38.gc5Base.txt
which is distributed with PennCNV.However, when I run the command:
I get the output:
The program runs fine without including the gcmodel file. What might be causing this error?
The text was updated successfully, but these errors were encountered: