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Fix variable error
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jonperdomo committed Jun 20, 2024
1 parent 8d4ec22 commit 05f3ba7
Showing 1 changed file with 1 addition and 2 deletions.
3 changes: 1 addition & 2 deletions src/hts_reader.cpp
Original file line number Diff line number Diff line change
Expand Up @@ -118,8 +118,7 @@ int HTSReader::readNextRecords(int batch_size, Output_BAM & output_data, std::mu
hts_base_mod_state *state = hts_base_mod_state_alloc();
std::map<int32_t, std::tuple<char, char, double, int>> query_base_modifications;
if (bam_parse_basemod(record, state) >= 0) {
mod_tag_present = true;


// Get the chromosome if alignments are present
bool alignments_present = true;
std::string chr;
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