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rfctr(csv): minify HTML and table text is cct
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Include TSV in the mix since they are essentially clones of each other.
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scanny committed Oct 18, 2024
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3 changes: 2 additions & 1 deletion CHANGELOG.md
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@@ -1,4 +1,4 @@
## 0.16.1-dev2
## 0.16.1-dev3

### Enhancements

Expand All @@ -11,6 +11,7 @@
* **Minify text_as_html from DOCX.** Previously `.metadata.text_as_html` for DOCX tables was "bloated" with whitespace and noise elements introduced by `tabulate` that produced over-chunking and lower "semantic density" of elements. Reduce HTML to minimum character count without preserving all text.
* **Fall back to filename extension-based file-type detection for unidentified OLE files.** Resolves a problem where a DOC file that could not be detected as such by `filetype` was incorrectly identified as a MSG file.
* **Minify text_as_html from XLSX.** Previously `.metadata.text_as_html` for DOCX tables was "bloated" with whitespace and noise elements introduced by `pandas` that produced over-chunking and lower "semantic density" of elements. Reduce HTML to minimum character count without preserving all text.
* **Minify text_as_html from CSV.** Previously `.metadata.text_as_html` for CSV tables was "bloated" with whitespace and noise elements introduced by `pandas` that produced over-chunking and lower "semantic density" of elements. Reduce HTML to minimum character count without preserving all text.

## 0.16.0

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126 changes: 29 additions & 97 deletions test_unstructured/partition/test_constants.py
Original file line number Diff line number Diff line change
@@ -1,32 +1,32 @@
EXPECTED_TABLE = """<table border="1" class="dataframe">
<tbody>
<tr>
<td>Stanley Cups</td>
<td></td>
<td></td>
</tr>
<tr>
<td>Team</td>
<td>Location</td>
<td>Stanley Cups</td>
</tr>
<tr>
<td>Blues</td>
<td>STL</td>
<td>1</td>
</tr>
<tr>
<td>Flyers</td>
<td>PHI</td>
<td>2</td>
</tr>
<tr>
<td>Maple Leafs</td>
<td>TOR</td>
<td>13</td>
</tr>
</tbody>
</table>"""
EXPECTED_TABLE = (
"<table>"
"<tr><td>Stanley Cups</td><td/><td/></tr>"
"<tr><td>Team</td><td>Location</td><td>Stanley Cups</td></tr>"
"<tr><td>Blues</td><td>STL</td><td>1</td></tr>"
"<tr><td>Flyers</td><td>PHI</td><td>2</td></tr>"
"<tr><td>Maple Leafs</td><td>TOR</td><td>13</td></tr>"
"</table>"
)

EXPECTED_TABLE_SEMICOLON_DELIMITER = (
"<table>"
"<tr><td>Year</td><td>Month</td><td>Revenue</td><td>Costs</td><td/></tr>"
"<tr><td>2022</td><td>1</td><td>123</td><td>-123</td><td/></tr>"
"<tr><td>2023</td><td>2</td><td>143,1</td><td>-814,38</td><td/></tr>"
"<tr><td>2024</td><td>3</td><td>215,32</td><td>-11,08</td><td/></tr>"
"</table>"
)

EXPECTED_TABLE_WITH_EMOJI = (
"<table>"
"<tr><td>Stanley Cups</td><td/><td/></tr>"
"<tr><td>Team</td><td>Location</td><td>Stanley Cups</td></tr>"
"<tr><td>Blues</td><td>STL</td><td>1</td></tr>"
"<tr><td>Flyers</td><td>PHI</td><td>2</td></tr>"
"<tr><td>Maple Leafs</td><td>TOR</td><td>13</td></tr>"
"<tr><td>👨\\U+1F3FB🔧</td><td>TOR</td><td>15</td></tr>"
"</table>"
)

EXPECTED_TABLE_XLSX = (
"<table>"
Expand Down Expand Up @@ -54,74 +54,6 @@
"Year Month Revenue Costs 2022 1 123 -123 2023 2 143,1 -814,38 2024 3 215,32 -11,08"
)

EXPECTED_TABLE_SEMICOLON_DELIMITER = """<table border="1" class="dataframe">
<tbody>
<tr>
<td>Year</td>
<td>Month</td>
<td>Revenue</td>
<td>Costs</td>
<td></td>
</tr>
<tr>
<td>2022</td>
<td>1</td>
<td>123</td>
<td>-123</td>
<td></td>
</tr>
<tr>
<td>2023</td>
<td>2</td>
<td>143,1</td>
<td>-814,38</td>
<td></td>
</tr>
<tr>
<td>2024</td>
<td>3</td>
<td>215,32</td>
<td>-11,08</td>
<td></td>
</tr>
</tbody>
</table>"""

EXPECTED_TABLE_WITH_EMOJI = """<table border="1" class="dataframe">
<tbody>
<tr>
<td>Stanley Cups</td>
<td></td>
<td></td>
</tr>
<tr>
<td>Team</td>
<td>Location</td>
<td>Stanley Cups</td>
</tr>
<tr>
<td>Blues</td>
<td>STL</td>
<td>1</td>
</tr>
<tr>
<td>Flyers</td>
<td>PHI</td>
<td>2</td>
</tr>
<tr>
<td>Maple Leafs</td>
<td>TOR</td>
<td>13</td>
</tr>
<tr>
<td>👨\\U+1F3FB🔧</td>
<td>TOR</td>
<td>15</td>
</tr>
</tbody>
</table>"""

EXPECTED_XLS_TABLE = (
"<table><tr>"
"<td>MC</td>"
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5 changes: 1 addition & 4 deletions test_unstructured/partition/test_csv.py
Original file line number Diff line number Diff line change
Expand Up @@ -200,11 +200,8 @@ def test_partition_csv_header():
)

table = elements[0]
assert clean_extra_whitespace(table.text) == (
"Stanley Cups Unnamed: 1 Unnamed: 2 " + EXPECTED_TEXT_XLSX
)
assert table.text == "Stanley Cups Unnamed: 1 Unnamed: 2 " + EXPECTED_TEXT_XLSX
assert table.metadata.text_as_html is not None
assert "<thead>" in table.metadata.text_as_html


# ================================================================================================
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43 changes: 19 additions & 24 deletions test_unstructured/partition/test_tsv.py
Original file line number Diff line number Diff line change
Expand Up @@ -14,7 +14,6 @@
)
from test_unstructured.unit_utils import assert_round_trips_through_JSON, example_doc_path
from unstructured.chunking.title import chunk_by_title
from unstructured.cleaners.core import clean_extra_whitespace
from unstructured.documents.elements import Table
from unstructured.partition.tsv import partition_tsv

Expand All @@ -31,21 +30,20 @@
def test_partition_tsv_from_filename(filename: str, expected_text: str, expected_table: str):
elements = partition_tsv(example_doc_path(filename), include_header=False)

assert clean_extra_whitespace(elements[0].text) == expected_text
assert elements[0].metadata.text_as_html == expected_table
assert elements[0].metadata.filetype == EXPECTED_FILETYPE
for element in elements:
assert element.metadata.filename == filename
table = elements[0]
assert table.text == expected_text
assert table.metadata.text_as_html == expected_table
assert table.metadata.filetype == EXPECTED_FILETYPE
assert all(e.metadata.filename == filename for e in elements)


def test_partition_tsv_from_filename_with_metadata_filename():
elements = partition_tsv(
example_doc_path("stanley-cups.tsv"), metadata_filename="test", include_header=False
)

assert clean_extra_whitespace(elements[0].text) == EXPECTED_TEXT
for element in elements:
assert element.metadata.filename == "test"
assert elements[0].text == EXPECTED_TEXT
assert all(e.metadata.filename == "test" for e in elements)


@pytest.mark.parametrize(
Expand All @@ -59,21 +57,20 @@ def test_partition_tsv_from_file(filename: str, expected_text: str, expected_tab
with open(example_doc_path(filename), "rb") as f:
elements = partition_tsv(file=f, include_header=False)

assert clean_extra_whitespace(elements[0].text) == expected_text
assert isinstance(elements[0], Table)
assert elements[0].metadata.text_as_html == expected_table
assert elements[0].metadata.filetype == EXPECTED_FILETYPE
for element in elements:
assert element.metadata.filename is None
table = elements[0]
assert isinstance(table, Table)
assert table.text == expected_text
assert table.metadata.text_as_html == expected_table
assert table.metadata.filetype == EXPECTED_FILETYPE
assert all(e.metadata.filename is None for e in elements)


def test_partition_tsv_from_file_with_metadata_filename():
with open(example_doc_path("stanley-cups.tsv"), "rb") as f:
elements = partition_tsv(file=f, metadata_filename="test", include_header=False)

assert clean_extra_whitespace(elements[0].text) == EXPECTED_TEXT
for element in elements:
assert element.metadata.filename == "test"
assert elements[0].text == EXPECTED_TEXT
assert all(element.metadata.filename == "test" for element in elements)


# -- .metadata.last_modified ---------------------------------------------------------------------
Expand Down Expand Up @@ -142,12 +139,10 @@ def test_partition_tsv_header():
example_doc_path("stanley-cups.tsv"), strategy="fast", include_header=True
)

e = elements[0]
assert (
clean_extra_whitespace(e.text) == "Stanley Cups Unnamed: 1 Unnamed: 2 " + EXPECTED_TEXT_XLSX
)
assert e.metadata.text_as_html is not None
assert "<thead>" in e.metadata.text_as_html
table = elements[0]
assert table.text == "Stanley Cups Unnamed: 1 Unnamed: 2 " + EXPECTED_TEXT_XLSX
assert table.metadata.text_as_html is not None
assert "<table>" in table.metadata.text_as_html


def test_partition_tsv_supports_chunking_strategy_while_partitioning():
Expand Down

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2 changes: 1 addition & 1 deletion unstructured/__version__.py
Original file line number Diff line number Diff line change
@@ -1 +1 @@
__version__ = "0.16.1-dev2" # pragma: no cover
__version__ = "0.16.1-dev3" # pragma: no cover
12 changes: 6 additions & 6 deletions unstructured/partition/csv.py
Original file line number Diff line number Diff line change
Expand Up @@ -5,9 +5,9 @@
from typing import IO, Any, Iterator

import pandas as pd
from lxml.html.soupparser import fromstring as soupparser_fromstring

from unstructured.chunking import add_chunking_strategy
from unstructured.common.html_table import HtmlTable
from unstructured.documents.elements import Element, ElementMetadata, Table
from unstructured.file_utils.model import FileType
from unstructured.partition.common.metadata import apply_metadata, get_last_modified_date
Expand Down Expand Up @@ -46,7 +46,6 @@ def partition_csv(
Whether True or False, the "text" field is always present in any Table element
and is the text content of the table (no structure).
"""

ctx = _CsvPartitioningContext.load(
file_path=filename,
file=file,
Expand All @@ -58,17 +57,18 @@ def partition_csv(
with ctx.open() as file:
dataframe = pd.read_csv(file, header=ctx.header, sep=ctx.delimiter, encoding=encoding)

html_text = dataframe.to_html(index=False, header=include_header, na_rep="")
text = soupparser_fromstring(html_text).text_content()
html_table = HtmlTable.from_html_text(
dataframe.to_html(index=False, header=include_header, na_rep="")
)

metadata = ElementMetadata(
filename=filename,
last_modified=ctx.last_modified,
text_as_html=html_text if infer_table_structure else None,
text_as_html=html_table.html if infer_table_structure else None,
)

# -- a CSV file becomes a single `Table` element --
return [Table(text=text, metadata=metadata, detection_origin=DETECTION_ORIGIN)]
return [Table(text=html_table.text, metadata=metadata, detection_origin=DETECTION_ORIGIN)]


class _CsvPartitioningContext:
Expand Down
15 changes: 8 additions & 7 deletions unstructured/partition/tsv.py
Original file line number Diff line number Diff line change
Expand Up @@ -3,9 +3,9 @@
from typing import IO, Any, Optional

import pandas as pd
from lxml.html.soupparser import fromstring as soupparser_fromstring

from unstructured.chunking import add_chunking_strategy
from unstructured.common.html_table import HtmlTable
from unstructured.documents.elements import Element, ElementMetadata, Table
from unstructured.file_utils.model import FileType
from unstructured.partition.common.common import (
Expand Down Expand Up @@ -42,22 +42,23 @@ def partition_tsv(
header = 0 if include_header else None

if filename:
table = pd.read_csv(filename, sep="\t", header=header)
dataframe = pd.read_csv(filename, sep="\t", header=header)
else:
assert file is not None
# -- Note(scanny): `SpooledTemporaryFile` on Python<3.11 does not implement `.readable()`
# -- which triggers an exception on `pd.DataFrame.read_csv()` call.
f = spooled_to_bytes_io_if_needed(file)
table = pd.read_csv(f, sep="\t", header=header)
dataframe = pd.read_csv(f, sep="\t", header=header)

html_text = table.to_html(index=False, header=include_header, na_rep="")
text = soupparser_fromstring(html_text).text_content()
html_table = HtmlTable.from_html_text(
dataframe.to_html(index=False, header=include_header, na_rep="")
)

metadata = ElementMetadata(
text_as_html=html_text,
filename=filename,
last_modified=get_last_modified_date(filename) if filename else None,
text_as_html=html_table.html,
)
metadata.detection_origin = DETECTION_ORIGIN

return [Table(text=text, metadata=metadata)]
return [Table(text=html_table.text, metadata=metadata)]

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