CompatHelper: add new compat entry for ADTypes at version 1, (keep existing compat) #283
CI.yml
on: pull_request
Documentation
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Matrix: test
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11 errors and 2 warnings
Julia 1.9 - ubuntu-latest - x64 - pull_request
Process completed with exit code 1.
|
Documentation:
../../../.julia/packages/Documenter/qoyeC/src/utilities/utilities.jl#L44
failed to run `@example` block in src/example.md:3-11
```@example 1
using Hyperelastics
using Optimization, OptimizationOptimJL
using ComponentArrays: ComponentVector
import ForwardDiff
using DifferentiationInterface
using CairoMakie
set_theme!(theme_latexfonts())
```
exception =
ArgumentError: Package DifferentiationInterface not found in current path.
- Run `import Pkg; Pkg.add("DifferentiationInterface")` to install the DifferentiationInterface package.
Stacktrace:
[1] macro expansion
@ ./loading.jl:1772 [inlined]
[2] macro expansion
@ ./lock.jl:267 [inlined]
[3] __require(into::Module, mod::Symbol)
@ Base ./loading.jl:1753
[4] #invoke_in_world#3
@ ./essentials.jl:926 [inlined]
[5] invoke_in_world
@ ./essentials.jl:923 [inlined]
[6] require(into::Module, mod::Symbol)
@ Base ./loading.jl:1746
[7] eval
@ ./boot.jl:385 [inlined]
[8] #58
@ ~/.julia/packages/Documenter/qoyeC/src/expander_pipeline.jl:754 [inlined]
[9] cd(f::Documenter.var"#58#60"{Module, Expr}, dir::String)
@ Base.Filesystem ./file.jl:112
[10] (::Documenter.var"#57#59"{Documenter.Page, Module, Expr})()
@ Documenter ~/.julia/packages/Documenter/qoyeC/src/expander_pipeline.jl:753
[11] (::IOCapture.var"#5#9"{DataType, Documenter.var"#57#59"{Documenter.Page, Module, Expr}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}})()
@ IOCapture ~/.julia/packages/IOCapture/Y5rEA/src/IOCapture.jl:170
[12] with_logstate(f::Function, logstate::Any)
@ Base.CoreLogging ./logging.jl:515
[13] with_logger
@ ./logging.jl:627 [inlined]
[14] capture(f::Documenter.var"#57#59"{Documenter.Page, Module, Expr}; rethrow::Type, color::Bool, passthrough::Bool, capture_buffer::IOBuffer, io_context::Vector{Any})
@ IOCapture ~/.julia/packages/IOCapture/Y5rEA/src/IOCapture.jl:167
[15] runner(::Type{Documenter.Expanders.ExampleBlocks}, node::MarkdownAST.Node{Nothing}, page::Documenter.Page, doc::Documenter.Document)
@ Documenter ~/.julia/packages/Documenter/qoyeC/src/expander_pipeline.jl:752
|
Documentation:
../../../.julia/packages/Documenter/qoyeC/src/utilities/utilities.jl#L44
failed to run `@example` block in src/example.md:15-27
```@example 1
f = Figure(size = (800,800))
ax = Makie.Axis(f[1,1], xlabel = "Stretch [-]", ylabel = "Stress [kg/cm²]")
treloar_data = Treloar1944Uniaxial()
scatter!(ax,
getindex.(treloar_data.data.λ, 1),
getindex.(treloar_data.data.s, 1),
label = "Treloar 1944 Experimental",
color = :black
)
axislegend(position = :lt)
save("treloar_data.png", f)
```
exception =
UndefVarError: `Figure` not defined
Stacktrace:
[1] top-level scope
@ example.md:16
[2] eval
@ ./boot.jl:385 [inlined]
[3] #58
@ ~/.julia/packages/Documenter/qoyeC/src/expander_pipeline.jl:754 [inlined]
[4] cd(f::Documenter.var"#58#60"{Module, Expr}, dir::String)
@ Base.Filesystem ./file.jl:112
[5] (::Documenter.var"#57#59"{Documenter.Page, Module, Expr})()
@ Documenter ~/.julia/packages/Documenter/qoyeC/src/expander_pipeline.jl:753
[6] (::IOCapture.var"#5#9"{DataType, Documenter.var"#57#59"{Documenter.Page, Module, Expr}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}})()
@ IOCapture ~/.julia/packages/IOCapture/Y5rEA/src/IOCapture.jl:170
[7] with_logstate(f::Function, logstate::Any)
@ Base.CoreLogging ./logging.jl:515
[8] with_logger
@ ./logging.jl:627 [inlined]
[9] capture(f::Documenter.var"#57#59"{Documenter.Page, Module, Expr}; rethrow::Type, color::Bool, passthrough::Bool, capture_buffer::IOBuffer, io_context::Vector{Any})
@ IOCapture ~/.julia/packages/IOCapture/Y5rEA/src/IOCapture.jl:167
[10] runner(::Type{Documenter.Expanders.ExampleBlocks}, node::MarkdownAST.Node{Nothing}, page::Documenter.Page, doc::Documenter.Document)
@ Documenter ~/.julia/packages/Documenter/qoyeC/src/expander_pipeline.jl:752
|
Documentation:
../../../.julia/packages/Documenter/qoyeC/src/utilities/utilities.jl#L44
failed to run `@example` block in src/example.md:52-56
```@example 1
prob = HyperelasticProblem(ψ, treloar_data, ComponentVector(μ = 0.2), ad_type = AutoForwardDiff())
sol = solve(prob, LBFGS())
return sol # hide
```
exception =
UndefVarError: `treloar_data` not defined
Stacktrace:
[1] top-level scope
@ example.md:53
[2] eval
@ ./boot.jl:385 [inlined]
[3] #58
@ ~/.julia/packages/Documenter/qoyeC/src/expander_pipeline.jl:754 [inlined]
[4] cd(f::Documenter.var"#58#60"{Module, Expr}, dir::String)
@ Base.Filesystem ./file.jl:112
[5] (::Documenter.var"#57#59"{Documenter.Page, Module, Expr})()
@ Documenter ~/.julia/packages/Documenter/qoyeC/src/expander_pipeline.jl:753
[6] (::IOCapture.var"#5#9"{DataType, Documenter.var"#57#59"{Documenter.Page, Module, Expr}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}})()
@ IOCapture ~/.julia/packages/IOCapture/Y5rEA/src/IOCapture.jl:170
[7] with_logstate(f::Function, logstate::Any)
@ Base.CoreLogging ./logging.jl:515
[8] with_logger
@ ./logging.jl:627 [inlined]
[9] capture(f::Documenter.var"#57#59"{Documenter.Page, Module, Expr}; rethrow::Type, color::Bool, passthrough::Bool, capture_buffer::IOBuffer, io_context::Vector{Any})
@ IOCapture ~/.julia/packages/IOCapture/Y5rEA/src/IOCapture.jl:167
[10] runner(::Type{Documenter.Expanders.ExampleBlocks}, node::MarkdownAST.Node{Nothing}, page::Documenter.Page, doc::Documenter.Document)
@ Documenter ~/.julia/packages/Documenter/qoyeC/src/expander_pipeline.jl:752
|
Documentation:
../../../.julia/packages/Documenter/qoyeC/src/utilities/utilities.jl#L44
failed to run `@example` block in src/example.md:60-74
```@example 1
models = Dict(
Gent => ComponentVector(μ=240e-3, J_m=80.0),
EdwardVilgis => ComponentVector(Ns=0.10, Nc=0.20, α=0.001, η=0.001),
NeoHookean => ComponentVector(μ=200e-3),
Beda => ComponentVector(C1=0.1237, C2=0.0424, C3=7.84e-5, K1=0.0168, α=0.9, β=0.68, ζ=3.015)
)
sol = Dict{Any, SciMLSolution}()
for (ψ, p_0) in models
HEProblem = HyperelasticProblem(ψ(), treloar_data, p_0, ad_type = AutoForwardDiff())
sol[ψ] = solve(HEProblem, NelderMead())
end
return sol # hide
```
exception =
UndefVarError: `treloar_data` not defined
Stacktrace:
[1] top-level scope
@ ./example.md:70
[2] eval
@ ./boot.jl:385 [inlined]
[3] #58
@ ~/.julia/packages/Documenter/qoyeC/src/expander_pipeline.jl:754 [inlined]
[4] cd(f::Documenter.var"#58#60"{Module, Expr}, dir::String)
@ Base.Filesystem ./file.jl:112
[5] (::Documenter.var"#57#59"{Documenter.Page, Module, Expr})()
@ Documenter ~/.julia/packages/Documenter/qoyeC/src/expander_pipeline.jl:753
[6] (::IOCapture.var"#5#9"{DataType, Documenter.var"#57#59"{Documenter.Page, Module, Expr}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}})()
@ IOCapture ~/.julia/packages/IOCapture/Y5rEA/src/IOCapture.jl:170
[7] with_logstate(f::Function, logstate::Any)
@ Base.CoreLogging ./logging.jl:515
[8] with_logger
@ ./logging.jl:627 [inlined]
[9] capture(f::Documenter.var"#57#59"{Documenter.Page, Module, Expr}; rethrow::Type, color::Bool, passthrough::Bool, capture_buffer::IOBuffer, io_context::Vector{Any})
@ IOCapture ~/.julia/packages/IOCapture/Y5rEA/src/IOCapture.jl:167
[10] runner(::Type{Documenter.Expanders.ExampleBlocks}, node::MarkdownAST.Node{Nothing}, page::Documenter.Page, doc::Documenter.Document)
@ Documenter ~/.julia/packages/Documenter/qoyeC/src/expander_pipeline.jl:752
|
Documentation:
../../../.julia/packages/Documenter/qoyeC/src/utilities/utilities.jl#L44
failed to run `@example` block in src/example.md:78-88
```@example 1
f = Figure(size = (800,800))
ax = Makie.Axis(f[1,1], xlabel = "Stretch [-]", ylabel = "Stress [kg/cm²]")
for (ψ, p) in sol
pred = predict(ψ(), treloar_data, p.u, ad_type = AutoForwardDiff())
lines!(ax, getindex.(pred.data.λ, 1), getindex.(pred.data.s, 1), label=string(ψ))
end
scatter!(ax, getindex.(treloar_data.data.λ, 1), getindex.(treloar_data.data.s, 1), label = "Treloar 1944 Experimental", color = :black)
axislegend(position = :lt)
save("treloar_data_fits.png", f) # hide
```
exception =
UndefVarError: `Figure` not defined
Stacktrace:
[1] top-level scope
@ example.md:79
[2] eval
@ ./boot.jl:385 [inlined]
[3] #58
@ ~/.julia/packages/Documenter/qoyeC/src/expander_pipeline.jl:754 [inlined]
[4] cd(f::Documenter.var"#58#60"{Module, Expr}, dir::String)
@ Base.Filesystem ./file.jl:112
[5] (::Documenter.var"#57#59"{Documenter.Page, Module, Expr})()
@ Documenter ~/.julia/packages/Documenter/qoyeC/src/expander_pipeline.jl:753
[6] (::IOCapture.var"#5#9"{DataType, Documenter.var"#57#59"{Documenter.Page, Module, Expr}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}})()
@ IOCapture ~/.julia/packages/IOCapture/Y5rEA/src/IOCapture.jl:170
[7] with_logstate(f::Function, logstate::Any)
@ Base.CoreLogging ./logging.jl:515
[8] with_logger
@ ./logging.jl:627 [inlined]
[9] capture(f::Documenter.var"#57#59"{Documenter.Page, Module, Expr}; rethrow::Type, color::Bool, passthrough::Bool, capture_buffer::IOBuffer, io_context::Vector{Any})
@ IOCapture ~/.julia/packages/IOCapture/Y5rEA/src/IOCapture.jl:167
[10] runner(::Type{Documenter.Expanders.ExampleBlocks}, node::MarkdownAST.Node{Nothing}, page::Documenter.Page, doc::Documenter.Document)
@ Documenter ~/.julia/packages/Documenter/qoyeC/src/expander_pipeline.jl:752
|
Documentation:
../../../.julia/packages/Documenter/qoyeC/src/utilities/utilities.jl#L44
failed to run `@example` block in src/example.md:94-123
```@example 1
using DataInterpolations
ψ = SussmanBathe(treloar_data, k=4, interpolant = QuadraticSpline)
λ₁ = range(extrema(getindex.(treloar_data.data.λ, 1))..., length = 100)
uniaxial_prediction = HyperelasticUniaxialTest(λ₁, name = "Prediction")
pred = predict(ψ, uniaxial_prediction, [])
λ₁ = getindex.(treloar_data.data.λ, 1)
s₁ = getindex.(treloar_data.data.s, 1)
λ̂₁ = getindex.(pred.data.λ, 1)
ŝ₁ = getindex.(pred.data.s, 1)
f = Figure(size = (800,800))
ax = Makie.Axis(f[1,1], xlabel = "Stretch [-]", ylabel = "Stress [kg/cm²]")
lines!(
ax,
λ̂₁,
ŝ₁,
label = "Sussman-Bathe Approximation"
)
scatter!(
ax,
λ₁,
s₁,
label = "Treloar 1944 Experimental",
color = :black
)
axislegend(position = :lt)
save("sussman_bathe.png", f) # hide
```
exception =
UndefVarError: `treloar_data` not defined
Stacktrace:
[1] top-level scope
@ example.md:96
[2] eval
@ ./boot.jl:385 [inlined]
[3] #58
@ ~/.julia/packages/Documenter/qoyeC/src/expander_pipeline.jl:754 [inlined]
[4] cd(f::Documenter.var"#58#60"{Module, Expr}, dir::String)
@ Base.Filesystem ./file.jl:112
[5] (::Documenter.var"#57#59"{Documenter.Page, Module, Expr})()
@ Documenter ~/.julia/packages/Documenter/qoyeC/src/expander_pipeline.jl:753
[6] (::IOCapture.var"#5#9"{DataType, Documenter.var"#57#59"{Documenter.Page, Module, Expr}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}})()
@ IOCapture ~/.julia/packages/IOCapture/Y5rEA/src/IOCapture.jl:170
[7] with_logstate(f::Function, logstate::Any)
@ Base.CoreLogging ./logging.jl:515
[8] with_logger
@ ./logging.jl:627 [inlined]
[9] capture(f::Documenter.var"#57#59"{Documenter.Page, Module, Expr}; rethrow::Type, color::Bool, passthrough::Bool, capture_buffer::IOBuffer, io_context::Vector{Any})
@ IOCapture ~/.julia/packages/IOCapture/Y5rEA/src/IOCapture.jl:167
[10] runner(::Type{Documenter.Expanders.ExampleBlocks}, node::MarkdownAST.Node{Nothing}, page::Documenter.Page, doc::Documenter.Document)
@ Documenter ~/.julia/packages/Documenter/qoyeC/src/expander_pipeline.jl:752
|
Documentation:
../../../.julia/packages/Documenter/qoyeC/src/utilities/utilities.jl#L44
invalid local link/image: file does not exist in src/example.md
link =
@ast MarkdownAST.Image("treloar_data.png", "") do
MarkdownAST.Text("")
end
|
Documentation:
../../../.julia/packages/Documenter/qoyeC/src/utilities/utilities.jl#L44
invalid local link/image: file does not exist in src/example.md
link =
@ast MarkdownAST.Image("treloar_data_fits.png", "") do
MarkdownAST.Text("")
end
|
Documentation:
../../../.julia/packages/Documenter/qoyeC/src/utilities/utilities.jl#L44
invalid local link/image: file does not exist in src/example.md
link =
@ast MarkdownAST.Image("sussman_bathe.png", "") do
MarkdownAST.Text("")
end
|
Documentation
Process completed with exit code 1.
|
Julia 1.9 - ubuntu-latest - x64 - pull_request
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/checkout@v3, julia-actions/setup-julia@v1. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
|
Documentation
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/checkout@v3, julia-actions/setup-julia@v1. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
|