Releases: PoisotLab/NCBITaxonomy.jl
Releases · PoisotLab/NCBITaxonomy.jl
v0.4.0
NCBITaxonomy v0.4.0
Diff since v0.2.3
Closed issues:
- [out there] processing taxon identifiers via NLP (#44)
- Issue with lowercase search conflicting with vernaculars (#49)
Merged pull requests:
- Add onlysynonyms and rank to similarnames (#51) (@tpoisot)
- Replace lineage functions by AbstractTrees interface (#52) (@tpoisot)
- Update the documentation (#53) (@tpoisot)
- CompatHelper: add new compat entry for AbstractTrees at version 0.4, (keep existing compat) (#54) (@github-actions[bot])
v0.2.3
✅ preferscientific works now
v0.2.2
NCBITaxonomy v0.2.2
Diff since v0.2.1
Closed issues:
- Return the nearest names (#20)
- Function to disambiguate names (#43)
Merged pull requests:
- Add a function to get the nearest names (#42) (@tpoisot)
v0.2.1
NCBITaxonomy v0.2.1
Diff since v0.1.0
Closed issues:
- Taxonomic tree (#32)
-
50% of queries are returning NA; and, separately, exact matches aren't returning where appropriate (#36)
- pathogen.jl extended to also return species ranks where different than matched names (#37)
- In-part names only return the first element (#39)
Merged pull requests:
- CompatHelper: bump compat for "DataFrames" to "1.0" (#35) (@github-actions[bot])
- In-part / non-unique names (#40) (@tpoisot)
- Doc/hotfix (#41) (@tpoisot)
v0.1.0
NCBITaxonomy v0.1.0
Diff since v0.0.8
Closed issues:
- Use Scratch.jl (#27)
- Use Preferences.jl to store a single taxo db (#31)
- Use a central location for the taxonomy and default to PKG if not set (#33)
v0.0.5
NCBITaxonomy v0.0.5
Diff since v0.0.4
Closed issues:
- Add a freshness parameter (#23)
Merged pull requests:
