doc: add more comparison of pnetcdf and netcdf4 #169
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| name: Mac OSX with OpenMPI | |
| on: | |
| push: | |
| branches: [ master, test_github_actions ] | |
| paths-ignore: | |
| - '**/*.md' | |
| - '**/*.txt' | |
| - '**/*.1' | |
| - '**/*.jpg' | |
| - '**/*.png' | |
| - 'docs/*' | |
| - 'test/test_installed/*' | |
| pull_request: | |
| branches: [ master, test_github_actions ] | |
| paths-ignore: | |
| - '**/*.md' | |
| - '**/*.txt' | |
| - '**/*.1' | |
| - '**/*.jpg' | |
| - '**/*.png' | |
| - 'docs/*' | |
| - 'test/test_installed/*' | |
| env: | |
| OPENMPI_VERSION: 5.0.2 | |
| jobs: | |
| build: | |
| runs-on: macos-latest | |
| timeout-minutes: 90 | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Set up dependencies | |
| run: | | |
| # brew install gcc | |
| # which gcc | |
| # gcc --version | |
| # which gfortran | |
| brew install automake autoconf libtool m4 | |
| - name: Build OPENMPI | |
| run: | | |
| cd ${GITHUB_WORKSPACE} | |
| rm -rf OPENMPI ; mkdir OPENMPI ; cd OPENMPI | |
| VER_MAJOR=${OPENMPI_VERSION%.*} | |
| wget -q https://download.open-mpi.org/release/open-mpi/v${VER_MAJOR}/openmpi-${OPENMPI_VERSION}.tar.gz | |
| gzip -dc openmpi-${OPENMPI_VERSION}.tar.gz | tar -xf - | |
| cd openmpi-${OPENMPI_VERSION} | |
| ./configure --prefix=${GITHUB_WORKSPACE}/OPENMPI \ | |
| --silent \ | |
| --with-io-romio-flags="--with-file-system=ufs" \ | |
| --with-hwloc=internal \ | |
| --with-pmix=internal \ | |
| --with-libevent=internal \ | |
| --disable-mpi-fortran \ | |
| CC=gcc | |
| make -s LIBTOOLFLAGS=--silent V=1 -j 8 install > qout 2>&1 | |
| make -s -j 8 distclean >> qout 2>&1 | |
| - name: Build PnetCDF | |
| run: | | |
| cd ${GITHUB_WORKSPACE} | |
| autoreconf -i | |
| mkdir -p pnetcdf_output | |
| ./configure --enable-option-checking=fatal \ | |
| --enable-profiling \ | |
| pnc_ac_debug=yes \ | |
| --enable-burst_buffering \ | |
| --enable-subfiling \ | |
| --enable-thread-safe \ | |
| --with-pthread \ | |
| --disable-fortran \ | |
| --with-mpi=${GITHUB_WORKSPACE}/OPENMPI \ | |
| TESTMPIRUN="${GITHUB_WORKSPACE}/OPENMPI/bin/mpiexec --oversubscribe -n NP" \ | |
| TESTOUTDIR=${GITHUB_WORKSPACE}/pnetcdf_output | |
| make -j 8 tests | |
| - name: Print config.log | |
| if: ${{ always() }} | |
| run: | | |
| cat ${GITHUB_WORKSPACE}/config.log | |
| - name: make check | |
| run: | | |
| cd ${GITHUB_WORKSPACE} | |
| make check | |
| - name: Print test log files | |
| if: ${{ always() }} | |
| run: | | |
| cd ${GITHUB_WORKSPACE} | |
| fname=`find src test examples benchmarks -type f -name "*.log"` | |
| for f in $fname ; do \ | |
| bname=`basename $f` ; \ | |
| if test "x$bname" != xconfig.log ; then \ | |
| echo "-------- dump $f ----------------------------" ; \ | |
| cat $f ; \ | |
| fi ; \ | |
| done | |
| - name: make ptests | |
| run: | | |
| cd ${GITHUB_WORKSPACE} | |
| make ptests | |
| - name: make distcheck | |
| run: | | |
| cd ${GITHUB_WORKSPACE} | |
| make -j 8 distcheck DISTCHECK_CONFIGURE_FLAGS="--silent --with-mpi=${GITHUB_WORKSPACE}/OPENMPI" | |
| - name: Cleanup | |
| if: ${{ always() }} | |
| run: | | |
| cd ${GITHUB_WORKSPACE} | |
| make -s distclean | |
| rm -rf ${GITHUB_WORKSPACE}/pnetcdf_output | |
| rm -rf ${GITHUB_WORKSPACE}/OPENMPI | |