Avoid overwriting of the pressure sensor data with date and timestamp

In favor of the new flex tip rack definitions, remove the old ot3 definitions

BREAKING CHANGE: all usage of "opentrons_ot3_96_tiprack_*" labware loadnames should be replaced by
"opentrons_flex_96_tiprack_*"

Co-authored-by: Laura Cox <[email protected]>

* Fix notify-server restarting wrong process.

* Use consistent dependency order; push server-utils before robot-server.

* Remove stale todo.

* fix(app): Labware Setup DQA fixes

fixes various styling issues found on the protocol labware setup page as well as fixing a bug where the interstitial opening/closing states where not showing on the labware latch button

closes RAUT-493

---------

Co-authored-by: Brian Cooper <[email protected]>

center align the protocol name text on the run failed summary splash screen on ODD

closes RAUT-517

…oveLabware, ui changes (#12968)

closes RAUT-512 RAUT-519 RAUT-505 RAUT-509 RAUT-523

…bware is loaded (#13003)

By adding codes to the response models we can make sure they're always
expressed by all the random overriding models

We can now express error codes in top level error responses and handle
and format them from the eneumerated errors that the rest of the system
will soon throw.

There's some interesting detail there around the MultiErrorResponse and
the ErrorResponse but with multiple errors captured inside of it... I'm
not sure what the right play is, but this is working out for me.

There are some response format changes for some of the messages; we can
fix these by making the exceptions that are being turned into the error
responses EnumeratedErrors that are properly formatted.

* Add ODD round corners to LegacyModal and update stories that used it [RAUT-420]

* Update spacing on GenericWizardTile and maximize animation size [RAUT-420]

fix(app): Protocol Setup Detail Pages DQA round3

closes RAUT-524


Co-authored-by: Brian Cooper <[email protected]>

…ered. (#12971)

fix(app): fix Touchscreen Sleep scrolling issue

* Addresses issues noted in the second round of DQA on the ODD robot dashboard

closes RAUT-513

…ute (#13004)

* Begone `machine` arg from execute methods.

* Remove unnecessary getattrs for api_level.

* Report robot type from opentrons.protocols.parse.

* Resolve some type: ignores with the global hardware controller.

* Report labware paths from labware_from_paths().

Also fix a typo in the test and the unnecessary sorted() that was hiding it.

* Allow protocol_file to be BinaryIO.

Address design QA feedback from the first pass at LPC in ODD

Closes RAUT-446

…deck labware (#12997)

closes RAUT-525

updates some styling to give the header on the ODD settings page a lower box shadow when the page is
scrolled

closes RAUT-454

updates some styling to give the header on the ODD settings page a lower box shadow when the page is
scrolled

closes RAUT-454

…names (#13015)

…12975)

feat(app): add a new type, `outlinedError` for red frame and add tests for LegacyModal components

fix(app): labware setup modal updates to match designs

…ention modals (#13005)

Include react-spring to manage orchestration of performant async svg animations.

Closes RLAB-316

---------

Co-authored-by: John Bowser <[email protected]>

feat(app, components): add a new const to spacing constants

This fun little script can parse through serial log captures from an ot3
and print out some stuff about the motion, like a per-axis dump of the
motor and encoder position tracking.

If you click on an axes you get a little vertical line to line things up.

Didn't handle the special nodes for the motor axes properly, oops.

There was a bug in the date parse for the older logs that just have 1
second resolution, and also we changed the repr for the add linear move
requests when we changed the acceleration units.

…the originating node name (#13042)

remove console erros and fix broken stories

change overflow-wrap for a long name protocol

Add tap to close on Snackbar component

adds a SlotLabels component that shows the Flex slot labels, to be used as a RobotWorkSpace child
component

closes RAUT-511

…13041)

…slot, modals, and copy updates (#13022)

closes RLIQ-413, RLIQ-414, RAUT-535, RAUT-536, RAUT-537

add e-stop screen

…ck map (#13047)

adds flex slot labels to protocol designer deck setup map

closes RAUT-526

…13040)

make buttonType in SmallButton and LargeButton optional and set primary as the default buttonType

…ight (#13048)

add heater-shaker confirmation modal

* fix(app): any interactions on an analysis failed protocol card display the delete modal

* attempted fix for repl calibration issue

* lint fixes

* attempted event loop fix

…3001)

…eprom (#12847)

* Added EEPROMDriver class to read/write data from the EEPROM
* Added EEPROMDriver to OT3Controller so we can access EEPROMData from elsewhere in the system
* Created SystemDrivers holding a class to make it easier for _build_system_hardware to return one item

* Add a step to update the download links on https://opentrons.com/ot-app/.
* Add a step to check https://pypi.org/project/opentrons/ for a successful deployment.
* Clarify that we mean the Python Protocol API docs when we say "release the docs."
* Fix formatting, especially with code blocks that were accidentally dedented outside of the list items that were supposed to contain them.

…ex eeprom. (#13054)

#13043)

closes RAUT-514

closes RLIQ-407

…xes during LPC (#13006)

* added retractAxis engine command
* retract pipette z axis before and after moving to trash
---------

Co-authored-by: Shlok Amin <[email protected]>

closes RAUT-486

…pette during grav tests (#13053)

* feat(app): update device reset for gripper calibration

Passing mock rundata to avoid causing the undefined data rloload rror

…ht (#13064)

Changes for 0.13.0

…13016)

Adds PAPI support for the labware and adapter split.

)

* change Flex front USB port number to 9 to disabiguate

* updates for simulation and emulation

Co-authored-by: Ed Cormany <[email protected]>

Now that we can express error codes in all our client interfaces, let's start raising them.

This PR makes the opentrons_hardware module use the new exceptions that have the new error codes. There's a couple new error codes, but mostly all this does is raise different exceptions in the same places.

The two exception is in the can messenger and the movegrouprunner.
CAN Messenger

The CAN messenger has this asyncio task that reads stuff asynchronously from the bus and passes it to registered listeners. In addition, if a message is an error message it would raise an exception. But, it's a task, so that exception doesn't go anywhere. #12963 made this exception just logged and swallowed but, like... why does it exist? So we removed it.
MoveGroupRunner

A similar issue happens in MoveGroupRunner, where a background task accumulates responses and then pops them on over to the caller. This works the same now, but we can also move the move stop condition checking inside that loop. We can also now properly handle having multiple errors in a move group!

Note: You need to run make setup-py again since now hardware depends on shared-data.

* Specify expected nodes when clearing move groups

…class (#13038)

…pettes (#12966)

…data (#13074)

* Fix a bug where the `--custom-labware-path` (`-L`), `--custom-data-path` (`-D`), and `--custom-data-file`) (`-d`) arguments to `opentrons_execute` had no effect. This closes #9256.
* In the `--help` text, clarify how `--custom-labware-path` (`-L)` affects the default behavior of searching the current working directory.
* Refactor: Remove some unnecessary `getattr()` calls to read attributes that should always be present.

…o the unused partition. (#13077)

…dpoints (#13067)

* Added stubbed-out endpoints to query estop status and reset it
* Added a simple integration test for the new endpoints

* Add applyHistoricalOffsets to app config and default it to true [RAUT-437]

Just as the create run from protocol function spreads in all known custom labware files when
creating a protocol record on a robot, the send to robot feature should also include custom labware.

Adds firmware version to the instruments endpoint to make frontend lives easier

* refactor(app): update error boundary design and add trackEvent

* feat(app): add estop modals for desktop

closes RAUT-529

…ate. (#13087)

…13099)