More netpyne tests

OpenSourceBrain · Jul 31, 2024 · eb9b8f7 · eb9b8f7
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Showing 4 changed files with 36 additions and 2 deletions.
diff --git a/neuroConstruct/generatedNeuroML2/.test.jnmlnetpyne.omt b/neuroConstruct/generatedNeuroML2/.test.jnmlnetpyne.omt
@@ -0,0 +1,17 @@
+# Script for running automated tests on OSB using Travis-CI, see https://github.com/OpenSourceBrain/osb-model-validation
+
+target: LEMS_Thalamocortical.xml 
+engine: jNeuroML_NetPyNE
+mep: .test.mep
+experiments:
+  Current clamp:
+    observables:
+      spike times:
+        file: 
+          path: CG_CML_0.0.dat
+          columns: [0,1]
+          scaling: [1, 1]
+        spike detection: 
+          method: threshold
+          threshold: 0
+        tolerance: 0.0006224451876625568
diff --git a/neuroConstruct/generatedNeuroML2/.test.jnmlnrn.omt b/neuroConstruct/generatedNeuroML2/.test.jnmlnrn.omt
@@ -14,4 +14,4 @@ experiments:
         spike detection: 
           method: threshold
           threshold: 0
-        tolerance: 0.000623
+        tolerance: 0.0006224451876625568
diff --git a/neuroConstruct/generatedNeuroML2/.test.l23frb.jnmlnetpyne.omt b/neuroConstruct/generatedNeuroML2/.test.l23frb.jnmlnetpyne.omt
@@ -0,0 +1,17 @@
+# Script for running automated tests on OSB using Travis-CI, see https://github.com/OpenSourceBrain/osb-model-validation
+
+target: LEMS_L23PyrFRB.xml
+engine: jNeuroML_NetPyNE
+mep: ../../NeuroML2/test/.test.l23frb.mep
+experiments:
+  L23FRB:
+    observables:
+      spike times:
+        file: 
+          path: CGsuppyrFRB_0.0.dat
+          columns: [0,1]
+          scaling: [1, 1]
+        spike detection: 
+          method: threshold
+          threshold: 0
+        tolerance: 0.0060422960725075164
diff --git a/neuroConstruct/generatedNeuroML2/.test.l23frb.jnmlnrn.omt b/neuroConstruct/generatedNeuroML2/.test.l23frb.jnmlnrn.omt
@@ -14,4 +14,4 @@ experiments:
         spike detection: 
           method: threshold
           threshold: 0
-        tolerance: 0.006043
+        tolerance: 0.006042296072507726