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Minor adjustment in the order and naming CellRanger needs the Multi CSV library fields #5

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merged 2 commits into from
Oct 15, 2024

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@glrs glrs commented Oct 15, 2024

This pull request includes a change to the generate_multi_sample_csv method in the lib/realms/tenx/run_sample.py file to update the CSV format for the libraries section.

CSV Format Update:

  • lib/realms/tenx/run_sample.py: Modified the header and the order of fields written to the CSV file in the generate_multi_sample_csv method. The header now includes fastq_id, fastqs, and feature_types, and the fields are written in the order of sample, fastqs, and library_type.

@glrs glrs merged commit 7a7ff2d into NationalGenomicsInfrastructure:main Oct 15, 2024
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