Skip to content

Commit

Permalink
Update README.md
Browse files Browse the repository at this point in the history
  • Loading branch information
carsen-stringer authored Aug 28, 2023
1 parent 9fc08c9 commit 963c4e1
Showing 1 changed file with 3 additions and 3 deletions.
6 changes: 3 additions & 3 deletions README.md
Original file line number Diff line number Diff line change
Expand Up @@ -3,8 +3,8 @@
![tests](https://github.com/mouseland/rastermap/actions/workflows/test_and_deploy.yml/badge.svg)
[![codecov](https://codecov.io/gh/MouseLand/rastermap/branch/main/graph/badge.svg?token=9FFo4zNtYP)](https://codecov.io/gh/MouseLand/rastermap)
[![PyPI version](https://badge.fury.io/py/rastermap.svg)](https://badge.fury.io/py/rastermap)
[![Downloads](https://pepy.tech/badge/rastermap)](https://pepy.tech/project/rastermap)
[![Downloads](https://pepy.tech/badge/rastermap/month)](https://pepy.tech/project/rastermap)
[![Downloads](https://static.pepy.tech/badge/rastermap)](https://pepy.tech/project/rastermap)
[![Downloads](https://static.pepy.tech/badge/rastermap/month)](https://pepy.tech/project/rastermap)
[![Python version](https://img.shields.io/pypi/pyversions/rastermap)](https://pypistats.org/packages/rastermap)
[![Licence: GPL v3](https://img.shields.io/github/license/MouseLand/rastermap)](https://github.com/MouseLand/rastermap/blob/main/LICENSE)
[![Contributors](https://img.shields.io/github/contributors-anon/MouseLand/rastermap)](https://github.com/MouseLand/rastermap/graphs/contributors)
Expand All @@ -15,7 +15,7 @@

Rastermap is a discovery algorithm for neural data. The algorithm was written by Carsen Stringer and Marius Pachitariu. For support, please open an [issue](https://github.com/MouseLand/rastermap/issues). Please see install instructions [below](README.md/#Installation). If you use Rastermap in your work, please cite the [paper](https://www.biorxiv.org/content/10.1101/2023.07.25.550571v1):

Stringer C., Zhong L., Syeda A., Du F., & Pachitariu M. (2023). Rastermap: a discovery method for neural population recordings. *bioRxiv* 2023.07.25.550571; doi: https://doi.org/10.1101/2023.07.25.550571
Stringer C., Zhong L., Syeda A., Du F., Kesa M., & Pachitariu M. (2023). Rastermap: a discovery method for neural population recordings. *bioRxiv* 2023.07.25.550571; doi: https://doi.org/10.1101/2023.07.25.550571

Rastermap runs in python 3.8+ and has a graphical user interface (GUI) for running it easily. Rastermap can also be run in a jupyter notebook locally or on google colab, see these demos:
* [rastermap_largescale.ipynb](notebooks/rastermap_largescale.ipynb) [![Open In Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://colab.research.google.com/github/MouseLand/rastermap/blob/main/notebooks/rastermap_largescale.ipynb) shows how to use it with large-scale data from mouse cortex (> 200 neurons)
Expand Down

0 comments on commit 963c4e1

Please sign in to comment.