Releases: MiraGeoscience/geoh5py
Releases · MiraGeoscience/geoh5py
v0.10.0-beta.1
What's Changed
- Update release by @domfournier in #563
- Support for python 3.11 and 3.12 [GEOPY-1494] by @SamuelBradley in #551
- GEOPY-1609: merge main to develop branch by @sebhmg in #569
- GEOPY-1620: geoh5py develop branch lost fixes around drillhole group by @domfournier in #573
- GEOPY-1591: unstable test test_cell_from_part by @domfournier in #575
- GEOPY-1380: Convert base forms to pydantic ui json class by @benk-mira in #571
- [pre-commit.ci] pre-commit autoupdate by @pre-commit-ci in #546
- Bump jinja2 from 3.1.3 to 3.1.4 by @dependabot in #552
- GEOPY-1609: update with 0.9.1 by @sebhmg in #578
- image description by @RichardScottOZ in #582
- GEOPY-1602: Refactor input arguments of class instantiation by @domfournier in #568
- GEOPY-1638: Convert mesh_type uuid to class type in ObjectForm by @benk-mira in #583
- GEOPY-1674: Fail reading Geometric data by @domfournier in #585
- GEOPY-1637: Allow default state (empty string) for all forms by @benk-mira in #584
- GEOPY-1697: use pydantic plugin for mypy by @sebhmg in #581
- DEVOPS-452: Update package with python-poetry-template by @SophieCurinier in #587
- also run tests on Windows for Python 3.11 and 3.12 by @sebhmg in #588
- GEOPY-1656: Always check/closed EM loops and return warning by @domfournier in #591
- DEVOPS-439: Switch from poetry to hatch by @SophieCurinier in #590
- GEOPY-1710: Find more efficient computation for DrapeModel centroids by @domfournier in #592
- GEOPY-1664: Property group type validation is broken by @domfournier in #594
- GEOPY-1645: Update for geoh5py refactor of class instantiation by @domfournier in #593
- REVERT-590: Revert "DEVOPS-439: Switch from poetry to hatch" by @domfournier in #596
- GEOPY-1668: Continue refactoring on Data classes. by @domfournier in #597
- GEOPY-1718: allow dependency on not bool data by @MatthieuCMira in #595
- DEVOPS-440: Fixup README by using regular double quotes by @SophieCurinier in #600
- GEOPY-1738: Crash handling GI queries by @domfournier in #602
- GEOPY-1706: Add empty string to uid validator and flatten method in base class an… by @benk-mira in #603
- GEOPY-1720: Fix handling of geometric data from reference data table with user names by @domfournier in #601
- GEOPY-1749: Point simpeg-driver to geoh5py feature 0.10.0 by @domfournier in #604
- GEOPY-1749: Point simpeg-driver to geoh5py feature 0.10.0 by @domfournier in #605
- GEOPY-1749: Point simpeg-driver to geoh5py feature 0.10.0 by @domfournier in #606
- GEOPY-1749: Point simpeg-driver to geoh5py feature 0.10.0 by @domfournier in #610
- GEOPY-1574: Modify UIJson to use pydantic structure with forms by @benk-mira in #609
- GEOPY-1624: loaddrillhole group table as a numpy array by @MatthieuCMira in #608
- GEOPY-1738: _r2 by @domfournier in #614
- GEOPY-1760: Fix required based on logic dependent by @domfournier in #612
- GEOPY-1758: define dtytpe in DataClass as a class attribute and use this attribute where it's needed by @MatthieuCMira in #613
- GEOPY-1720: _r2 by @domfournier in #615
- GEOPY-1767: Support Value map with bytes by @domfournier in #617
- GEOPY-1770: add a method to update metadata without rewriting everything by @MatthieuCMira in #618
- GEOPY-1712: Exclude RUFF005 by @SophieCurinier in #620
- DEVOPS-471: Merge windows and unix python reusable workflow in one file by @SophieCurinier in #622
- GEOPY-1719: allow input active cells instead of topography by @domfournier in #621
- GEOPY-1755: Property group refactor by @domfournier in #623
- GEOPY-1755: create an object to access all the data of a property group in a recarray by @MatthieuCMira in #619
- DEVOPS-466: Update input variable in shared workflows by @SophieCurinier in #616
- GEOPY-1774: Re-order the inversion inputs following users comments by @domfournier in #626
- DEVOPS-466: rename python_ver input variable for consistency by @SophieCurinier in #628
- GEOPY-1669: Final clean up of Object class by @MatthieuCMira in #625
- GEOPY-1774: Re-order the inversion inputs following users comments by @domfournier in #631
- GEOPY-1333: geoh5py uijson documentation by @benk-mira in #630
- GEOPY-1670: change shutil move for copy by @MatthieuCMira in #632
- GEOPY-1682: Add new data_type attributes by @MatthieuCMira in #633
- GEOPY-1733: Block model centroids not computed correctly for negative cell delimiters by @benk-mira in #634
- GEOPY-1682: Add new data_type attributes by @MatthieuCMira in #637
- GEOPY-1139: update the readme of geoh5py by @benk-mira in #636
- GEOPY-1798: fail to open workspace due to data_type mapping expected to be "cdf" by @sebhmg in #643
- GEOPY-1797: wrong minimum Python version in geoh5py doc by @sebhmg in #640
- GEOPY-1781: tests of las-goh5 fail with geoh5 0.10.0 by @domfournier in #638
- GEOPY-1139: update the readme of geoh5py by @benk-mira in #644
- GEOPY-1739: add new InterpretationSection group by @MatthieuCMira in #627
- DEVOPS-504: Add deployment workflows by @SophieCurinier in #629
- GEOPY-1802: Copying drillhole groups crashes by @domfournier in #649
- DEVOPS-511: Update deploy workflows to release pip package on pypi by @SophieCurinier in #647
- DEVOPS-515: adjustments: update precommit and codecov publish by @sebhmg in #650
- GEOPY-1165: Check for properties for Property Group Type - Implement Property Group Type: Simple by @MatthieuCMira in #645
- GEOPY-1165: b by @domfournier in #651
- GEOPY-1811: Use latest "Tx ID tx property" on all EM surveys. by @domfournier in #652
- GEOPY-1815: Can't read DrillholeGroup with Strike/dip property_group_type by @MatthieuCMira in #654
New Contributors
- @SamuelBradley made their first contribution in #551
- @SophieCurinier made their first contribution in #587
Full Changelog: v0.9.1...v0.10.0-beta.1
Contributors
SamuelBradley, sebhmg, and 7 other contributors
Assets 2
v0.9.1
What's Changed
- GEOPY-1559: Update docs for all release branches by @domfournier in #566
- GEOPY-1619: allow python 3.11, 3.12, newer numpy and scipy by @sebhmg in #572
Full Changelog: v0.9.0...v0.9.1
Contributors
sebhmg and domfournier
Assets 2
v0.9.0
What's Changed
- GEOPY-1062: Add merging utility for Points
- GEOPY-1092: Add collect_values method to collect values from property_groups.
- GEOPY-1045: Add merging of DrapeModel objects
- GEOPY-1102: Add merging of curve objects
- GEOPY-1144, GEOPY-1147: Increment property_group name if already exists.
- GEOPY-1287: Fix handling of byte strings.
- GEOPY-1297: Expose data tables from DrillholeGroup.
- GEOPY-1296: Allow access of Concatenated data in array form.
- GEOPY-1335: Improve drillholes tables memory and access.
- GEOPY-1332: Adapt geoh5py for drillhole group in ui.json form.
- GEOPY-1328: Issue loading Bool data in mode="r".
- GEOPY-1364: Facilitate metadata assignation to object.
- GEOPY-1351: Implement referenced data in depth_tables add_data.
- GEOPY-1349: Fix get_data() for ConcatenatedPropertyGroup.
- GEOPY-1441: Suppress unnecessary warnings triggered in set_enabled.
- GEOPY-1434: Fix DrillholeGroup exported for monitoring directory.
- GEOPY-532: Re-order curve parts for ANALYST efficiency.
- GEOPY-1440: Better handling of integer data.
- GEOPY-1418: Clean out empty property groups on drillhole objects after data removal.
- GEOPY-1439: Allow FileData associated to DrillholeGroup.
- GEOPY-1418: Avoid removing empty arrays.
- GEOPY-1460: Fix crash on remove_vertices of points object.
- GEOPY-1450: Handle Geoimage from tiff with float layers.
- GEOPY-1418: Clean out empty property groups on drillhole objects after data removal.
- GEOPY-1503: Octree mesh cell definition not update if record array.
- GEOPY-1539: Add a locations property to expose vertices or centroids on geoh5py.objects.ObjectBase.
- GEOPY-1032, GEOPY-1111, GEOPY-1217, GEOPY-1229, GEOPY-1230, GEOPY-1311, GEOPY-1321, GEOPY-1346, GEOPY-1349, GEOPY-1562: Better handling of Drillhole objects.
General maintenance
Full Changelog: v0.8.0...v0.9.0
v0.8.0
What's Changed
New features
- GEOPY-516: Add group selection uijson, by @domfournier in #323
- GEOPY-785: EM: Data Filters, by @benk-mira in #317
- GEOPY-720: Interface between uijson and inversion group metadata, by @domfournier in #325
- GEOPY-652: Input file: Handle multi select options uijson, by @domfournier in #326
- GEOPY-462: Flatten 2D array with warning, by @domfournier in #329
- GEOPY-741: Airborne FEM survey, by @benk-mira in #334
- GEOPY-913: ui.json update list (most minor), by @benk-mira in #337
- GEOPY-747: Ground FEM, by @benk-mira in #336
- GEOPY-747: Update uuids for large-loop surveys, by @benk-mira in #338
- GEOPY-715: Prototype joint inversion driver (single property), by @domfournier in #330
- GEOPY-919: Crop GeoImage on copy_from_extent, by @domfournier in #343
- GEOPY-915: Clip data on 2D grid after auto-cropping, by @domfournier in #342
- GEOPY-846: Support visual parameters, by @MatthieuCMira in #335
- GEOPY-262: geoh5 docs: improve navigation / show toctree level 3, by @jamiefb in #358
- GEOPY-241: Explicit creation of new workspace, by @domfournier in #361
- GEOPY-757: Add Ground TEM large-loop to geoapps, by @domfournier in #363
- GEOPY-846: Support visual parameters, by @domfournier in #360
- GEOPY-919: Crop GeoImage on copy_from_extent, by @MatthieuCMira in #353
- GEOPY-695: Expose Coordinate Reference System as property of objects, by @MatthieuCMira in #367
- GEOPY-1002: Have a dip property to geoimage: add dip to the conversion of geoimage and grid2d, by @MatthieuCMira in #372
- GEOPY-1002: Have a dip property to geoimage: changing the grid2d dip, by @MatthieuCMira in #371
- GEOPY-999: Raise ValueError for non-monotically increasing prism indices in drape model layers setter, by @benk-mira in #373
- GEOPY-695: Expose Coordinate Reference System as property of objects, by @domfournier in #374
- GEOPY-1002: Have a dip property to geoimage, by @MatthieuCMira in #370
- GEOPY-1012: Store depth/from-to data depending on what is provided by user, by @benk-mira in #378
- GEOPY-766: Creating a Boolean datatype, by @MatthieuCMira in #381
- GEOPY-766: better managing of potential no data values, by @MatthieuCMira in #382
- GEOPY-993: Creating a save_as function in workspace with path checking., by @MatthieuCMira in #383
- GEOPY-776: Support masking attributes, by @MatthieuCMira in #384
- GEOPY-1025: Improve docs strings for drape_model object, by @benk-mira in #385
- GEOPY-1008: address some type hint problems, by @benk-mira in #390
- GEOPY-1014: Crop geoimage by extent yields large files. Look into compression format of PIL, by @MatthieuCMira in #388
- GEOPY-1013: Manage warnings on geoimage copy_from_extent, by @MatthieuCMira in #389
- GEOPY-438: Allow property_groups query from workspace.get_entity, by @MatthieuCMira in #394
- GEOPY-708: Add a dependency check before warning that parameter is non-optional, by @domfournier in #395
- GEOPY-1035: Crash on Airborne TEM selection, by @domfournier in #398
- GEOPY-438: Allow property_groups query from workspace.get_entity, by @domfournier in #397
- GEOPY-438: Update, by @MatthieuCMira in #391
- GEOPY-1017: specify write compression (in scope of converting large OMF), by @jamiefb in #401
- GEOPY-923: Add content for all EM loop configurations, by @domfournier in #403
- GEOPY-479: Add zenodo doi, by @domfournier in #404
- GEOPY-1050: Add user guide for drapemodel, by @domfournier in #405
- GEOPY-1039: add group type to monitory_directory_copy, by @MatthieuCMira in #406
- GEOPY-1024: Prepare release geoh5py-0.8.0, by @domfournier in #409
- GEOPY-1032: Allow passing property group as a string to return existing property, by @benk-mira in #451
Fixes
- GEOPY-918: Nan showing up on clipped drillhole data, by @domfournier in #333
- GEOPY-987: Geoimage vertices not set by default when create the object with file, by @MatthieuCMira in #368
- GEOPY-992: Workspace creation from non-existent file should return deprecation warning, by @domfournier in #377
- GEOPY-1000: change uuid for all metadata on copy of EM objects, by @domfournier in #379
- GEOPY-1004: Test/fix UTF-8 in name and/or path, by @domfournier in #380
- GEOPY-1030: Concatenated drillhole data stored in property group can have different lengths when it should be collocated, by @benk-mira in #392
- GEOPY-1042: cannot create several property groups, by @MatthieuCMira in #400
- GEOPY-1055: ConcatenatedDrillhole object from and to properties don't handle empty property list correctly, by @benk-mira in #402
- GEOPY-1067: Error reading concatenated property_groups, by @domfournier in #410
- GEOPY-1080: Value map not updated, by @domfournier in #415
- GEOPY-1127: Fix warnings about group optional, by @domfournier in #442
Technical changes
- GEOPY-893: Update develop with 0.7.0, by @domfournier in #327
- GEOPY-947: replace os.path by pathlib, by @sebhmg in #347
- GEOPY-976: update version of pip, by @sebhmg in #357
- GEOPY-985: remove obsolete setup.py, by @sebhmg in #362
- GEOPY-882: fix codecov report, by @andrewg-mira in #387
- GEOPY-116: set Pillow to at least 10.0.1, by @sebhmg in #446
Full Changelog: v0.7.1...v0.8.0
Contributors
sebhmg, domfournier, and 4 other contributors
Assets 2
v0.7.1
v0.7.0
Main changes for geoh5py version 0.7.0 are:
New features:
- Add and improve function to copy entities from extent. (GEOPY-857, GEOPY-877)
- Handle geoh5 conversion from 4.2 (geoh5 v2.1) saved as 4.1 (geoh5 v2.0) format. (GEOPY-876)
Bug fixes:
- Throw user warning if change mode to "r+" to "r". (GEOPY-537)
- Fixes on drillhole copy and data selection. (GEOPY-667, GEOPY-668, GEOPY-723, GEOPY-848)
- Fix NDV not recognized on concatenated data. (GEOPY-851)
Technical issues:
- Add measure of maintainability with code climate. (GEOPY-862)
v0.6.1
v0.6.0
This release brings new conversion functionalities between objects, and an important update to the DrillholeGroup to make it compliant with ANALYST 4.2. format.
v0.5.0
This release brings new functionality and patches some bugs encountered with drillhole groups.
v0.4.0
A major release adding new classes and addressing issues with the DrillholeGroup class.