Script to provide pre-compiled binaries, built by GitHub actions, for linux/mac/windows #703
Workflow file for this run
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| name: Tests Ubuntu | |
| on: | |
| push: | |
| pull_request: | |
| jobs: | |
| build: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - name: Install dependencies | |
| run: sudo apt-get install flex bison | |
| - name: Build Virus Macrophage project | |
| run: | | |
| make virus-macrophage-sample | |
| make | |
| - name: Run Virus Macrophage cell lines project | |
| run: | | |
| ./virus-sample | |
| - name: Build PhysiMeSS project | |
| run: | | |
| make reset | |
| make physimess-sample | |
| make clean | |
| make | |
| - name: Run PhysiMeSS project | |
| run: | | |
| ./project | |
| ./project config/Fibre_Initialisation/mymodel_initialisation.xml | |
| ./project config/Cell_Fibre_Mechanics/mymodel_rotating.xml | |
| build_physiboss_celllines_binary: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Build PhysiBoSS Cell lines | |
| run: | | |
| make physiboss-cell-lines-sample | |
| make clean | |
| make Compile_MaBoSS | |
| make static STATIC_OPENMP=/usr/lib/gcc/x86_64-linux-gnu/11/libgomp.a | |
| ldd PhysiBoSS_Cell_Lines | |
| - name: Run PhysiBoSS model | |
| run: | | |
| ./PhysiBoSS_Cell_Lines | |
| - name: Build project archive | |
| run: | | |
| rm -fr config/PhysiCell_settings-backup.xml | |
| tar -zcvf physiboss-cell-lines-linux.tar.gz PhysiBoSS_Cell_Lines Makefile main.cpp config/ custom_modules/ | |
| - name: Save artifacts | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| name: physiboss_cell_lines_binary_linux | |
| path: PhysiBoSS_Cell_Lines | |
| - uses: actions/upload-release-asset@v1 | |
| if: github.event_name == 'release' | |
| env: | |
| GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} | |
| with: | |
| upload_url: ${{ github.event.release.upload_url }} | |
| asset_name: physiboss-cell-lines-linux.tar.gz | |
| asset_path: /home/runner/work/PhysiBoSS/PhysiBoSS/physiboss-cell-lines-linux.tar.gz | |
| asset_content_type: application/gzip |