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feat(timeit): add function timing decorator
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wpbonelli committed Sep 12, 2023
1 parent 0ce5714 commit 82f1194
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1 change: 1 addition & 0 deletions docs/index.rst
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Expand Up @@ -31,6 +31,7 @@ The `modflow-devtools` package provides a set of tools for developing and testin
md/download.md
md/ostags.md
md/zip.md
md/timeit.md


.. toctree::
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23 changes: 23 additions & 0 deletions docs/md/timeit.md
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# `timeit`

There is a `timeit` decorator function available in the `modflow_devtools.misc` module. Applying it to any function causes a (rough) runtime benchmark to be printed to `stdout` afterwards the function returns. For instance:

```python
@timeit
def sleep1dec():
sleep(0.001)

sleep1dec() # prints sleep1dec took \d+\.\d+ ms
```

Alternatively, with direct use:

```python
from time import sleep
from modflow_devtools.misc import timeit

def sleep1():
sleep(0.001)

timeit(sleep1)() # prints sleep1 took \d+\.\d+ ms
```
37 changes: 37 additions & 0 deletions modflow_devtools/misc.py
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import importlib
import socket
import sys
import time
import traceback
from contextlib import contextmanager
from functools import wraps
from importlib import metadata
from os import PathLike, chdir, environ, getcwd
from os.path import basename, normpath
Expand Down Expand Up @@ -442,3 +444,38 @@ def try_metadata() -> bool:
_has_pkg_cache[pkg] = found

return _has_pkg_cache[pkg]


def timeit(f):
"""
Decorator for estimating runtime of any function.
Prints estimated time to stdout, in milliseconds.
Parameters
----------
f : function
Function to time.
Notes
-----
Adapted from https://stackoverflow.com/a/27737385/6514033.
Returns
-------
function
The decorated function.
"""

@wraps(f)
def timed(*args, **kw):
ts = time.time()
res = f(*args, **kw)
te = time.time()
if "log_time" in kw:
name = kw.get("log_name", f.__name__.upper())
kw["log_time"][name] = int((te - ts) * 1000)
else:
print(f"{f.__name__} took {(te - ts) * 1000:.2f} ms")
return res

return timed
22 changes: 22 additions & 0 deletions modflow_devtools/test/test_misc.py
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import os
import re
import shutil
from os import environ
from pathlib import Path
from pprint import pprint
from time import sleep
from typing import List

import pytest
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has_pkg,
set_dir,
set_env,
timeit,
)


Expand Down Expand Up @@ -283,3 +286,22 @@ def test_has_pkg(virtualenv):
).strip()
== exp
)


def test_timeit1(capfd):
def sleep1():
sleep(0.001)

timeit(sleep1)()
cap = capfd.readouterr()
assert re.match(r"sleep1 took \d+\.\d+ ms", cap.out)


def test_timeit2(capfd):
@timeit
def sleep1dec():
sleep(0.001)

sleep1dec()
cap = capfd.readouterr()
assert re.match(r"sleep1dec took \d+\.\d+ ms", cap.out)

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