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refactor: support python 3.12, various updates #265

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refactor: support python 3.12, various updates

refactor: support python 3.12, various updates #265

Workflow file for this run

.github/workflows/ci.yml at 9d10532
name: CI
on:
push:
paths-ignore:
- '**.md'
pull_request:
branches:
- main
- develop
paths-ignore:
- '**.md'
jobs:
lint:
name: Lint
runs-on: ubuntu-latest
steps:
- name: Checkout repo
uses: actions/checkout@v4
- name: Setup Python
uses: actions/setup-python@v4
with:
python-version: 3.8
cache: 'pip'
cache-dependency-path: pyproject.toml
- name: Install Python packages
run: |
pip install .
pip install ".[lint]"
- name: Run isort
run: isort --verbose --check --diff modflow_devtools
- name: Run black
run: black --check --diff modflow_devtools
- name: Run flake8
run: flake8 --count --show-source --exit-zero modflow_devtools
- name: Run pylint
run: pylint --jobs=0 --errors-only --exit-zero modflow_devtools
build:
name: Build
runs-on: ubuntu-latest
steps:
- name: Checkout repo
uses: actions/checkout@v3
- name: Setup Python
uses: actions/setup-python@v4
with:
python-version: 3.8
- name: Install Python packages
run: |
pip install --upgrade pip
pip install build twine
pip --verbose install .
- name: Print package version
run: python -c "import modflow_devtools; print(modflow_devtools.__version__)"
- name: Build package
run: python -m build
- name: Check distribution
run: twine check --strict dist/*
test:
name: Test
needs:
- build
- lint
runs-on: ${{ matrix.os }}
strategy:
fail-fast: false
matrix:
os: [ ubuntu-22.04, macos-12, windows-2022 ]
python: [ 3.8, 3.9, "3.10", "3.11", "3.12" ]
env:
GCC_V: 11
steps:
- name: Checkout repo
uses: actions/checkout@v4
with:
path: modflow-devtools
- name: Checkout modflow6
uses: actions/checkout@v4
with:
repository: MODFLOW-USGS/modflow6
path: modflow6
- name: Checkout modflow6 examples
uses: actions/checkout@v4
with:
repository: MODFLOW-USGS/modflow6-examples
path: modflow6-examples
- name: Checkout modflow6 test models
uses: actions/checkout@v3
with:
repository: MODFLOW-USGS/modflow6-testmodels
path: modflow6-testmodels
- name: Checkout modflow6 large test models
uses: actions/checkout@v3
with:
repository: MODFLOW-USGS/modflow6-largetestmodels
path: modflow6-largetestmodels
- name: Install executables
uses: modflowpy/install-modflow-action@v1
- name: Setup GNU Fortran ${{ env.GCC_V }}
uses: awvwgk/setup-fortran@main
with:
compiler: gcc
version: ${{ env.GCC_V }}
- name: Setup Python
uses: actions/setup-python@v4
with:
python-version: ${{ matrix.python }}
- name: Install Python packages
working-directory: modflow-devtools
run: |
pip install .
pip install ".[test]"
- name: Cache modflow6 examples
id: cache-examples
uses: actions/cache@v3
with:
path: modflow6-examples/examples
key: modflow6-examples-${{ hashFiles('modflow6-examples/data/**') }}
- name: Install extra Python packages
if: steps.cache-examples.outputs.cache-hit != 'true'
working-directory: modflow6-examples/etc
run: |
pip install -r requirements.pip.txt
pip install -r requirements.usgs.txt
- name: Build modflow6 example models
if: steps.cache-examples.outputs.cache-hit != 'true'
working-directory: modflow6-examples/etc
run: python ci_build_files.py
- name: Run local tests
working-directory: modflow-devtools/autotest
env:
REPOS_PATH: ${{ github.workspace }}
# use --dist loadfile to so tests requiring pytest-virtualenv run on the same worker
run: pytest -v -n auto --dist loadfile --durations 0 --ignore test_download.py
- name: Run network-dependent tests
# only invoke the GH API on one OS and Python version
# to avoid rate limits (1000 rqs / hour / repository)
# https://docs.github.com/en/actions/learn-github-actions/usage-limits-billing-and-administration#usage-limits
if: runner.os == 'Linux' && matrix.python == '3.8'
working-directory: modflow-devtools/autotest
env:
REPOS_PATH: ${{ github.workspace }}
GITHUB_TOKEN: ${{ github.token }}
run: pytest -v -n auto --durations 0 test_download.py