revise links and references (#2)

README.md

@@ -1,18 +1,21 @@
 # MITprof
 
-[This repository][] contains the MITprof Matlab toolbox and its documentation ([MITprof_demo.m][]). For user support, if needed, contact <[email protected]> or <[email protected]>. Citation for this repository: 
+[This repository][] contains the MITprof Matlab toolbox. For user support, if needed, contact <[email protected]> or <[email protected]>. Citation for this repository: 
 
 [![DOI](https://zenodo.org/badge/76183059.svg)](https://zenodo.org/badge/latestdoi/76183059)
 
 [This repository]: https://github.com/gaelforget/MITprof
-[MITprof_demo.m]: https://github.com/gaelforget/MITprof/blob/master/MITprof_demo.m
 
 [MITprof data sets]: http://dx.doi.org/10.7910/DVN/EE3C40
 [gcmfaces toolbox]: https://github.com/gaelforget/gcmfaces
 [MITgcm]: http://mitgcm.org/
 [ECCO v4 r2]: https://github.com/gaelforget/ECCO_v4_r2
+[gcmfaces.pdf]: https://github.com/gaelforget/gcmfaces/blob/master/gcmfaces.pdf
+[MITprof_demo.m]: https://github.com/gaelforget/MITprof/blob/master/MITprof_demo.m
+[example_MITprof.m]: https://github.com/gaelforget/gcmfaces/blob/master/sample_analysis/example_MITprof.m
+
+**MITprof** is a Matlab toolbox designed to (1) standardize ocean profile data collections for use with the [MITgcm][] ‘profiles’ and state estimation packages (Forget et al., 2015) and (2) manipulate and analyze [MITprof data sets][] in combination with the [gcmfaces toolbox][] and ocean state estimates such as [ECCO v4 r2][] (Forget et al., 2016). Download directions in [gcmfaces.pdf][] provide users with a set up to demo MITprof capabilities using [MITprof_demo.m][] and [example_MITprof.m][].
 
-**MITprof** is a Matlab toolbox designed to (1) process ocean profile data collections for use with the [MITgcm][] ‘profiles’ and state estimation packages (Forget et al., 2015) and (2) manipulate and analyze [MITprof data sets][] in combination with the [gcmfaces toolbox][] and ocean state estimates such as [ECCO v4 r2][] (Forget et al., 2016). 
 
 Forget, G., Campin, J.-M., Heimbach, P., Hill, C. N., Ponte, R. M., and Wunsch, C.: ECCO version 4: an integrated framework for non-linear inverse modeling and global ocean state estimation, Geosci. Model Dev., 8, 3071-3104, doi:10.5194/gmd-8-3071-2015, 2015, URL http://www.geosci-model-dev.net/8/3071/2015/