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libEnsemble-complete-CI #156

libEnsemble-complete-CI

libEnsemble-complete-CI #156

Workflow file for this run

name: libEnsemble-complete-CI
on:
workflow_dispatch:
jobs:
test-libE:
runs-on: ${{ matrix.os }}
strategy:
fail-fast: false
matrix:
os: [ubuntu-latest]
mpi-version: [mpich]
python-version: [3.9, "3.10", "3.11", "3.12"]
pydantic-version: ["2.6.4"]
comms-type: [m, l]
include:
- os: macos-latest
python-version: 3.11
mpi-version: mpich
pydantic-version: "2.6.4"
comms-type: m
- os: macos-latest
python-version: 3.11
mpi-version: mpich
pydantic-version: "2.6.4"
comms-type: l
env:
HYDRA_LAUNCHER: "fork"
TERM: xterm-256color
GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
defaults:
run:
shell: bash -l {0}
steps:
- uses: actions/checkout@v4
- name: Setup conda - Python ${{ matrix.python-version }}
uses: conda-incubator/setup-miniconda@v3
with:
activate-environment: condaenv
miniconda-version: "latest"
python-version: ${{ matrix.python-version }}
channels: conda-forge
channel-priority: flexible
auto-update-conda: true
- name: Force-update certifi
run: |
python --version
pip install -I --upgrade certifi
- name: Install Ubuntu compilers
if: matrix.os == 'ubuntu-latest'
run: conda install gcc_linux-64
# Roundabout solution on macos for proper linking with mpicc
- name: Install macOS compilers
if: matrix.os == 'macos-latest'
run: |
conda install clang_osx-64
- name: Install mpi4py and MPI from conda
if: (matrix.python-version != '3.10' && matrix.os == 'ubuntu-latest') || matrix.os == 'macos-latest'
run: |
conda install mpi4py ${{ matrix.mpi-version }}
- name: Install mpi4py from pip, MPI from conda
if: matrix.python-version == '3.10' && matrix.os == 'ubuntu-latest'
run: |
conda install ${{ matrix.mpi-version }}
pip install mpi4py flake8
- name: Install generator dependencies
run: |
python -m pip install --upgrade pip
pip install flake8
pip install -r install/testing_requirements.txt
conda env update --file install/gen_deps_environment.yml
- name: $$$ ADD DEPS HERE &&& Install libEnsemble, flake8, lock environment
run: |
pip install ax-platform
pip install pydantic==${{ matrix.pydantic-version }}
pip install -e .
flake8 libensemble
- name: Install gpcam
if: matrix.python-version != '3.12'
run: |
pip install gpcam
- name: Remove various tests on newer pythons
if: matrix.python-version >= '3.11'
run: |
rm ./libensemble/tests/regression_tests/test_ytopt_heffte.py
rm ./libensemble/tests/regression_tests/test_gpCAM.py
rm ./libensemble/tests/regression_tests/test_persistent_gp.py
- name: Remove test for persistent Tasmanian on Python 3.12
if: matrix.python-version >= '3.12'
run: |
rm ./libensemble/tests/regression_tests/test_persistent_tasmanian.py
rm ./libensemble/tests/regression_tests/test_persistent_tasmanian_async.py
- name: Remove Balsam/Globus-compute tests on Pydantic 2
if: matrix.pydantic-version == '2.6.4'
run: |
rm ./libensemble/tests/unit_tests/test_ufunc_runners.py
rm ./libensemble/tests/unit_tests/test_executor_balsam.py
- name: Run extensive tests, Ubuntu
if: matrix.os == 'ubuntu-latest'
run: |
./libensemble/tests/run-tests.sh -ue -z -${{ matrix.comms-type }}
- name: Run extensive tests, macOS
if: matrix.os == 'macos-latest'
run: |
./libensemble/tests/run-tests.sh -ue -z -${{ matrix.comms-type }}
- name: Merge coverage
run: |
mv libensemble/tests/.cov* .
- name: Upload coverage reports to Codecov
uses: codecov/codecov-action@v4
env:
CODECOV_TOKEN: ${{ secrets.CODECOV_TOKEN }}
spellcheck:
name: Spellcheck release branch
if: contains(github.base_ref, 'develop')
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v4
- uses: crate-ci/[email protected]