Snakemake profile for the SLURM job scheduler, based off of the snakemake slurm profile cookiecutter, but with some changes to make it work better.
To use, clone this into your per-user or global configuration
directory (on Linux, ~/.config/snakemake/ or /etc/xdg/snakemake/,
respectively) and pass --profile snakemake-slurm (or whatever the
directory these files reside in is called) when running snakemake.
Note that, as of 2021-May-05, this has been modified so it works with conda environments within singularity containers, for NYU Greene