Bump tqdm from 4.19.5 to 4.66.3 in /scripts #188
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| name: j-pet-continuous-integration-tests | |
| on: [push, pull_request] | |
| jobs: | |
| build_and_run_all_tests_on_ubuntu: | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| matrix: | |
| os: [ubuntu-22.04, ubuntu-20.04, ubuntu-18.04] | |
| steps: | |
| - uses: actions/checkout@v2 | |
| with: | |
| submodules: recursive | |
| - name: system update | |
| run: | | |
| sudo apt-get -qq update | |
| sudo apt-get install -y git libboost-all-dev libtbb-dev cmake libfftw3-3 libfftw3-dev sshpass | |
| - name: set branch name | |
| run: | | |
| echo "GITHUB_REF=${GITHUB_REF}" | |
| GITHUB_BRANCH=${GITHUB_REF##*\/} | |
| if [ "${GITHUB_BRANCH}" = "master" ]; then echo "BRANCH=master" | tee ${GITHUB_ENV}; | |
| else echo "BRANCH=develop" | tee ${GITHUB_ENV}; | |
| fi | |
| - name: download ROOT (for ubuntu 22.04) | |
| run: | | |
| wget https://root.cern/download/root_v6.26.02.Linux-ubuntu22-x86_64-gcc11.2.tar.gz | |
| tar xzf root_v6.26.02.Linux-ubuntu22-x86_64-gcc11.2.tar.gz | |
| if: matrix.os == 'ubuntu-22.04' | |
| - name: download ROOT (for ubuntu 20.04) | |
| run: | | |
| wget https://root.cern/download/root_v6.24.02.Linux-ubuntu20-x86_64-gcc9.3.tar.gz | |
| tar xzf root_v6.24.02.Linux-ubuntu20-x86_64-gcc9.3.tar.gz | |
| if: matrix.os == 'ubuntu-20.04' | |
| - name: download ROOT (for ubuntu-18.04) | |
| run: | | |
| wget http://sphinx.if.uj.edu.pl/framework/root-6-20-06-ubuntu18-jpet.tar.gz | |
| tar xzf root-6-20-06-ubuntu18-jpet.tar.gz | |
| if: matrix.os == 'ubuntu-18.04' | |
| - name: build unpacker | |
| run: | | |
| source root/bin/thisroot.sh | |
| git clone https://github.com/JPETTomography/Unpacker2.git --single-branch --branch ${BRANCH} unpacker | |
| mkdir -p unpacker/build | |
| cd unpacker/build | |
| cmake .. | |
| cmake --build . -j$(nproc) | |
| sudo make install | |
| cd ../.. | |
| - name: build j-pet framework | |
| run: | | |
| source root/bin/thisroot.sh | |
| source unpacker/build/bin/thisunpacker.sh | |
| rm -rf j-pet-framework || true | |
| git clone --single-branch --branch ${BRANCH} https://github.com/JPETTomography/j-pet-framework.git | |
| mkdir -p j-pet-framework/build | |
| cd j-pet-framework/build | |
| cmake .. | |
| cmake --build . -j $(nproc) | |
| cd ../.. | |
| - name: build framework examples | |
| run: | | |
| source root/bin/thisroot.sh | |
| source unpacker/build/bin/thisunpacker.sh | |
| source j-pet-framework/build/bin/thisframework.sh | |
| mkdir build | |
| cd build | |
| cmake .. | |
| make -j $(nproc) | |
| make tests_largebarrel | |
| make tests_imagereconstruction | |
| make tests_calibProg | |
| - name: run lifetime calibration test | |
| run: | | |
| source root/bin/thisroot.sh | |
| source unpacker/build/bin/thisunpacker.sh | |
| cd build/TimeCalibration_lifetime | |
| ctest -j6 -C Debug -T test --output-on-failure | |
| - name: run image reconstruction test | |
| run: | | |
| source root/bin/thisroot.sh | |
| source unpacker/build/bin/thisunpacker.sh | |
| cd build/ImageReconstruction | |
| ctest -j6 -C Debug -T test --output-on-failure | |
| - name: run large barrel test | |
| run: | | |
| source root/bin/thisroot.sh | |
| cd build/LargeBarrelAnalysis | |
| ctest -j6 -C Debug -T test --output-on-failure | |
| wget http://sphinx.if.uj.edu.pl/~alek/framework_integration_tests/dabc_17025151847.hld | |
| wget http://sphinx.if.uj.edu.pl/~alek/framework_integration_tests/setupRun3.json | |
| ./LargeBarrelAnalysis.x -t hld -f dabc_17025151847.hld -l setupRun3.json -i 3 -r 0 100 | |
| mkdir outdir | |
| ./LargeBarrelAnalysis.x -t hld -f dabc_17025151847.hld -l setupRun3.json -i 3 -r 0 100 -o outdir | |
| ./LargeBarrelAnalysis.x -t root -f dabc_17025151847.hld.root -l setupRun3.json -i 3 -r 0 100 | |
| sed -i 's/manager.useTask("TimeWindowCreator", "hld", "tslot.calib");//' ../../LargeBarrelAnalysis/main.cpp | |
| make LargeBarrelAnalysis.x | |
| ./LargeBarrelAnalysis.x -t root -f dabc_17025151847.tslot.calib.root -r 0 100 |