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Fix a possible NULL pointer dereference in tests #6

Fix a possible NULL pointer dereference in tests

Fix a possible NULL pointer dereference in tests #6

name: linux autotools aocc ompi
on:
push:
pull_request:
branches:
- develop
paths-ignore:
- '.github/CODEOWNERS'
- '.github/FUNDING.yml'
- 'doc/**'
- 'release_docs/**'
- 'ACKNOWLEDGEMENTS'
- 'COPYING**'
- '**.md'
# Using concurrency to cancel any in-progress job or run
concurrency:
group: ${{ github.workflow }}-${{ github.sha || github.event.pull_request.number }}
cancel-in-progress: true
permissions:
contents: read
jobs:
build:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v4
- name: Install System dependencies
run: |
sudo apt update
sudo apt install -y libaec-dev zlib1g-dev automake autoconf libcurl4-openssl-dev libjpeg-dev wget curl bzip2 m4 flex bison cmake libzip-dev doxygen openssl libtool libtool-bin build-essential libncurses-dev libquadmath0 libstdc++6 libxml2
- name: Install AOCC 4.1.0
run: |
wget https://download.amd.com/developer/eula/aocc/aocc-4-1/aocc-compiler-4.1.0.tar
tar -xvf aocc-compiler-4.1.0.tar
cd aocc-compiler-4.1.0
bash install.sh
source /home/runner/work/hdf5/hdf5/setenv_AOCC.sh
which clang
which flang
clang -v
- name: Install OpenMPI 4.1.5
run: |
export LD_LIBRARY_PATH=/home/runner/work/hdf5/hdf5/aocc-compiler-4.1.0/lib:/usr/local/lib
wget https://download.open-mpi.org/release/open-mpi/v4.1/openmpi-4.1.5.tar.gz
tar zxvf openmpi-4.1.5.tar.gz
cd openmpi-4.1.5
./configure CC=/home/runner/work/hdf5/hdf5/aocc-compiler-4.1.0/bin/clang FC=/home/runner/work/hdf5/hdf5/aocc-compiler-4.1.0/bin/flang --prefix=/usr/local
make
sudo make install
- name: Install HDF5
env:
NPROCS: 2
run: |
export LD_LIBRARY_PATH=/home/runner/work/hdf5/hdf5/aocc-compiler-4.1.0/lib:/usr/local/lib/openmpi:/usr/local/lib
export LD_RUN_PATH=/home/runner/work/hdf5/hdf5/aocc-compiler-4.1.0/lib:/usr/local/lib/openmpi:/usr/local/lib
export PATH=/usr/local/bin:$PATH
./autogen.sh
./configure --prefix=/tmp --enable-parallel --enable-shared CC=/usr/local/bin/mpicc LDFLAGS="-L/home/runner/work/hdf5/hdf5/aocc-compiler-4.1.0/lib -L/usr/local/lib/openmpi"
make -j
make check -j
make install
make uninstall