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@garrettjstevens garrettjstevens released this 22 Jun 20:42
· 16 commits to develop since this release
2.6.5
483e16e

This release contains a fix that caused users to not be able to build due to a change to the Grails servers. See grails/grails-core#11825. If you are not able to upgrade Apollo to this version but still are experiencing build failures, you can update your BuildConfig.groovy file as in this PR: 2624.

Features

  • Added method to upload bulk functional annotations from JSON in the interface. 2617,2618
  • Added a "topLevel" option to the "getFeatures" web services endpoint that causes the endpoint to return top-level (e.g. gene) features. 2616

Bug Fixes

  • Removed deprecation from SequenceController.sequenceByName. 2619
  • Fix contextual menu for blastview tracks. Thanks @abretaud. 2621
  • Make Python libraries installed globally in Docker image. 2622
  • Update mavenRepo to fix error grails server error during build, see grails/grails-core#11825. 2624

Full change long for all versions can be found here: https://github.com/GMOD/Apollo/blob/develop/ChangeLog.md

Docker builds are on docker hub: https://hub.docker.com/r/gmod/apollo

Please review the documentation pages for more details: http://genomearchitect.readthedocs.io/en/latest/

Note: You can find a guide to upgrading existing Apollo installations here: https://genomearchitect.readthedocs.io/en/latest/Migration.html

Report issues if found.
Active mailing list ([email protected]) and google group.

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